Anchorpoints

Gene id
AT4G12550
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G12090extensin-like protein (ELP);extensin-like protein1-View
AT1G12100Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, flower, leaf, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1+View
AT1G62500Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22142.1); Has 57491 Blast hits to 29077 proteins in 1537 species: Archae - 155; Bacteria - 10434; Metazoa - 25836; Fungi - 4596; Plants - 8968; Viruses - 1548; Other Eukaryotes - 5954 (source: NCBI BLink).;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1+View
AT1G62510Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, cotyledon, leaf whorl, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12490.1); Has 25891 Blast hits to 3864 proteins in 588 species: Archae - 46; Bacteria - 7812; Metazoa - 1674; Fungi - 617; Plants - 4225; Viruses - 1248; Other Eukaryotes - 10269 (source: NCBI BLink).;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1-View
AT4G22460Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12510.1); Has 751 Blast hits to 745 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 751; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4-View
AT4G22490Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: azelaic acid induced 1 (TAIR:AT4G12470.1); Has 708 Blast hits to 702 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 708; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G35730scaffold_6-View
AL6G35740scaffold_6-View
AL6G35760scaffold_6-View
AL6G35770scaffold_6-View
AL6G35780scaffold_6-View
AL6G35790scaffold_6-View
AL7G19780scaffold_7+View
AL7G19810scaffold_7+View
AL1G12460scaffold_1-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G0012014 kDa proline-rich protein DC2.15, Precursor (similar to)LG5+View
FV5G0013036.4 kDa proline-rich protein (similar to)LG5+View
FV5G0014014 kDa proline-rich protein DC2.15, Precursor (similar to)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM17G1484017Gm17-View
GM17G1485017Gm17+View
GM17G1486017Gm17+View
GM17G1488017Gm17+View
GM17G1489017Gm17+View
GM17G1490017Gm17-View
GM17G1491017Gm17-View
GM17G1493017Gm17-View
GM05G0438005Gm05-View
GM05G0439005Gm05+View
GM05G0440005Gm05+View
GM05G0441005Gm05+View
GM05G0443005Gm05+View
GM05G0444005Gm05+View
GM05G0445005Gm05-View
GM05G0446005Gm05-View
GM05G0447005Gm05-View
GM05G0449005Gm05-View
GM15G1260015Gm15+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD09G0221909+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07035G01230scaffold07035+View
ME07035G01240scaffold07035-View
ME11581G00210scaffold11581-View
ME11581G00220scaffold11581+View
ME11581G00230scaffold11581+View
ME11581G00240scaffold11581-View
ME11581G00250scaffold11581-View
ME11581G00260scaffold11581-View
ME11581G00270scaffold11581-View
ME11581G00280scaffold11581-View
ME08265G05000scaffold08265+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G012340Proline-rich protein (AHRD V1 *--- C3SAB4_BRADI); contains Interpro domain(s) IPR013770 Plant lipid transfer protein and hydrophobic protein, helical5+View
MT5G012380Proline-rich protein (AHRD V1 *--- C3SAB3_BRADI); contains Interpro domain(s) IPR013770 Plant lipid transfer protein and hydrophobic protein, helical5+View
MT4G101260Cortical cell-delineating protein (AHRD V1 **-- B6UAC7_MAIZE); contains Interpro domain(s) IPR013770 Plant lipid transfer protein and hydrophobic protein, helical4+View
MT4G101270Proline rich protein (Fragment) (AHRD V1 *-*- P93274_MALDO); contains Interpro domain(s) IPR013770 Plant lipid transfer protein and hydrophobic protein, helical4+View
MT4G10128014 kDa proline-rich protein DC2.15 (AHRD V1 **-- P14009); contains Interpro domain(s) IPR013770 Plant lipid transfer protein and hydrophobic protein, helical4-View
MT4G10131014 kDa proline-rich protein DC2.15 (AHRD V1 **-- P14009); contains Interpro domain(s) IPR013770 Plant lipid transfer protein and hydrophobic protein, helical4+View
MT4G10133014 kDa proline-rich protein DC2.15 (AHRD V1 *--- P14009); contains Interpro domain(s) IPR013770 Plant lipid transfer protein and hydrophobic protein, helical4-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G10110PACid=17325039;name=POPTR_0003s11060;alias=pt023941m;scaffold_3+View
PT03G10120PACid=17312410;name=POPTR_0003s11070;alias=pt024561m;scaffold_3-View
PT01G00210PACid=17335375;name=POPTR_0001s00400;alias=pt040811m;scaffold_1-View
PT01G00220PACid=17341635;name=POPTR_0001s00410;alias=pt040714m,Pt-HPS.3,estExt_fgenesh4_pg.C_1270062;scaffold_1+View
PT01G00230PACid=17309357;name=POPTR_0001s00420;alias=pt039798m;scaffold_1-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC28455G0001028455-View
RC28455G0003028455+View
RC30174G0088030174+View
RC30174G0089030174-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC01G038070Tc01+View
TC01G038080Tc01-View
TC03G025220Tc03-View
TC03G025230Tc03+View
TC03G025280Tc03+View
TC03G025290Tc03+View
TC03G025300Tc03-View
TC03G025310Tc03+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G00260name=GSVIVG01001296001;chr2-View
VV02G00270name=GSVIVG01001297001;chr2+View
VV02G00280name=GSVIVG01001298001;chr2-View
VV02G00290name=GSVIVG01001299001;chr2-View


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Gene id
Species
Description
Chromosome
Strand