Anchorpoints

Gene id
AT4G00490
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G45880beta-amylase 7 (BAM7); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 2 (TAIR:AT4G00490.1); Has 965 Blast hits to 963 proteins in 157 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 3; Plants - 810; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).;beta-amylase 72-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G41140scaffold_6-View
AL4G33850scaffold_4-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00018G02460supercontig_18-View
CP00018G02470supercontig_18-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G08130Beta-amylase (similar to)LG7+View
FV7G08150Beta-amylase (probable)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G4663018Gm18-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G02954015+View
MD15G02959015+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03581G01820scaffold03581+View
ME03581G01840scaffold03581+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G07750PACid=17328410;name=POPTR_0014s07940;alias=pt035173m;scaffold_14-View
PT14G07760PACid=17324041;name=POPTR_0014s07950;alias=pt035310m;scaffold_14-View
PT02G15880PACid=17318544;name=POPTR_0002s16070;alias=pt020033m;scaffold_2-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G0280030174-View
RC30174G0281030174-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC01G036010Tc01+View
TC01G036020Tc01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G04870name=GSVIVG01026920001;chr15+View
VV15G04890name=GSVIVG01026922001;chr15+View


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Gene id
Species
Description
Chromosome
Strand