Anchorpoints
- Gene id
- AT3G09900
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id
Description
Chromosome
Strand
Multiplicon
AT5G03520 RAB GTPase homolog 8C (RAB8C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1E (TAIR:AT3G09900.1); Has 29771 Blast hits to 29709 proteins in 824 species: Archae - 21; Bacteria - 191; Metazoa - 15611; Fungi - 4242; Plants - 3476; Viruses - 20; Other Eukaryotes - 6210 (source: NCBI BLink).;RAB GTPase homolog 8C 5 + View AT5G03530 Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes.;RAB GTPase homolog C2A 5 - View
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id
Description
Chromosome
Strand
Multiplicon
AL6G02740 scaffold_6 + View AL6G02750 scaffold_6 - View AL3G10100 scaffold_3 + View AL3G10110 scaffold_3 - View
Carica papaya
Gene id
Description
Chromosome
Strand
Multiplicon
CP00092G00900 supercontig_92 - View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GM13G20970 13 Gm13 - View GM10G06780 10 Gm10 - View GM19G37020 19 Gm19 - View GM10G08020 10 Gm10 - View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME11069G00550 scaffold11069 - View ME11069G00560 scaffold11069 - View
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G03520 | RAB GTPase homolog 8C (RAB8C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1E (TAIR:AT3G09900.1); Has 29771 Blast hits to 29709 proteins in 824 species: Archae - 21; Bacteria - 191; Metazoa - 15611; Fungi - 4242; Plants - 3476; Viruses - 20; Other Eukaryotes - 6210 (source: NCBI BLink).;RAB GTPase homolog 8C | 5 | + | View |
| AT5G03530 | Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes.;RAB GTPase homolog C2A | 5 | - | View |
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL6G02740 | scaffold_6 | + | View | |
| AL6G02750 | scaffold_6 | - | View | |
| AL3G10100 | scaffold_3 | + | View | |
| AL3G10110 | scaffold_3 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00092G00900 | supercontig_92 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM13G20970 | 13 | Gm13 | - | View |
| GM10G06780 | 10 | Gm10 | - | View |
| GM19G37020 | 19 | Gm19 | - | View |
| GM10G08020 | 10 | Gm10 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME11069G00550 | scaffold11069 | - | View | |
| ME11069G00560 | scaffold11069 | - | View |