Anchorpoints

Gene id
AT1G59970
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G24140Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: matrix metalloproteinase (TAIR:AT1G70170.1); Has 2621 Blast hits to 2428 proteins in 195 species: Archae - 3; Bacteria - 89; Metazoa - 2200; Fungi - 4; Plants - 185; Viruses - 42; Other Eukaryotes - 98 (source: NCBI BLink).;Matrixin family protein1-View
AT1G70170mutant has Late flowering; Early senescence; Matrix Metalloproteinase;matrix metalloproteinase1+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G18560scaffold_2+View
AL1G25920scaffold_1-View
AL2G06170scaffold_2-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00005G03280supercontig_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV4G22480Metalloendoproteinase 1, Precursor (probable)LG4-View
FV4G22500Metalloendoproteinase 1, Precursor (similar to)LG4-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G1738018Gm18+View
GM08G4030008Gm08-View
GM02G0317002Gm02+View
GM02G0319002Gm02+View
GM02G0320002Gm02+View
GM02G0321002Gm02+View
GM02G0323002Gm02+View
GM02G0325002Gm02+View
GM02G0329002Gm02+View
GM02G0331002Gm02+View
GM02G0332002Gm02+View
GM01G0435001Gm01-View
GM01G0437001Gm01+View
GM01G0438001Gm01-View
GM01G0439001Gm01+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G016820chr2-View
LJ2G016830chr2-View
LJ2G016860chr2+View
LJ2G016890chr2+View
LJ2G016920chr2+View
LJ2G016950chr2-View
LJ2G016960chr2+View
LJ2G017020chr2-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G00588013+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11495G01130scaffold11495+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G13300name=GSVIVG01020151001;chr1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G39870metalloendoproteinase 1 (LOC100285384), mRNA5-View


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Gene id
Species
Description
Chromosome
Strand