Anchorpoints

Gene id
AL8G27080
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL5G03340scaffold_5+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G60910MADS box gene negatively regulated by APETALA1;AGAMOUS-like 85-View
AT3G02310MADS-box protein, binds K domain of AG in vivo;K-box region and MADS-box transcription factor family protein 3-View
AT3G30260AGAMOUS-like 79 (AGL79); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 7337 Blast hits to 7335 proteins in 920 species: Archae - 0; Bacteria - 2; Metazoa - 637; Fungi - 301; Plants - 6322; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).;AGAMOUS-like 793+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G21980MADS transcription factorBd1-View
BD1G08326Bd1+View
BD1G08340Homologous to Arabidopsis APETALA1Bd1+View
BD2G48690MADS transcription factorBd2-View
BD1G69890MADS transcription factorBd1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00001G01580supercontig_1+View
CP00014G02250supercontig_14+View
CP00014G02260supercontig_14+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G42060Agamous-like MADS-box protein AGL8 homolog (putative)LG6-View
FV6G42070Developmental protein SEPALLATA 1 (putative)LG6-View
FV5G11740Agamous-like MADS-box protein AGL8 homolog (putative)LG5-View
FV5G11750Developmental protein SEPALLATA 1 (probable)LG5-View
FV3G38340Agamous-like MADS-box protein AGL15 (probable)LG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G3181004Gm04-View
GM08G2767008Gm08+View
GM08G2768008Gm08+View
GM01G0813001Gm01+View
GM01G0815001Gm01+View
GM13G0673013Gm13+View
GM17G0889017Gm17+View
GM02G1342002Gm02+View
GM06G2265006Gm06+View
GM19G0432019Gm19+View
GM18G5090018Gm18+View
GM18G5091018Gm18+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ0G456200chr0-View
LJ0G456220chr0-View
LJ1G031210chr1+View
LJ1G031240chr1+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD09G0051409+View
MD09G0051609+View
MD09G0052109-View
MD09G0052409-View
MD13G00385013-View
MD06G0169406-View
MD06G0169906+View
MD06G0170206+View
MD14G02033014+View
MD14G02034014+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06656G00870scaffold06656-View
ME06656G00880scaffold06656-View
ME08359G01370scaffold08359-View
ME08359G01380scaffold08359-View
ME08359G01390scaffold08359-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G52680OsMADS32 %2D MADS%2Dbox family gene with MIKCc type%2Dbox, expressed1-View
OS07G41370OsMADS18 %2D MADS%2Dbox family gene with MIKCc type%2Dbox, expressed7+View
OS03G11614OsMADS1 %2D MADS%2Dbox family gene with MIKCc type%2Dbox, expressed3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G10150source=BGI China;type=FgeneSH;Chr03-View
OSINDICA_03G10160source=BGI China;type=FgeneSH;Chr03-View
OSINDICA_07G33660source=BGI China;type=FgeneSH;Chr07+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT12G05760PACid=17312432;name=POPTR_0012s05950;alias=pt043822m;scaffold_12+View
PT12G05770PACid=17307791;name=POPTR_0012s05960;alias=pt016787m;scaffold_12+View
PT10G15240PACid=17327107;name=POPTR_0010s16380;alias=pt012837m;scaffold_10-View
PT10G15250PACid=17329952;name=POPTR_0010s16390;alias=pt013419m;scaffold_10-View
PT04G11230PACid=17312841;name=POPTR_0004s11420;alias=pt007837m;scaffold_4-View
PT04G11240PACid=17316022;name=POPTR_0004s11430;alias=pt007547m;scaffold_4-View
PT04G11260PACid=17327507;name=POPTR_0004s11450;alias=pt007544m;scaffold_4-View
PT08G09590PACid=17312543;name=POPTR_0008s09780;alias=pt028472m;scaffold_8+View
PT08G09600PACid=17324760;name=POPTR_0008s09790;alias=pt027942m;scaffold_8+View
PT08G09610PACid=17309641;name=POPTR_0008s09800;alias=pt027946m;scaffold_8+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G0474030174-View
RC30174G0475030174-View
RC30138G0110030138-View
RC30138G0111030138-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G0333803chr_3-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC03G012600Tc03+View
TC03G012620Tc03+View
TC02G031670Tc02-View
TC02G031690Tc02-View
TC00G038300Tc00-View
TC00G038320Tc00-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G04840name=GSVIVG01008139001;chr17-View
VV17G04850name=GSVIVG01008140001;chr17-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G26720LOC542045 7-View
ZM01G08000MADS-box transcription factor 1 1-View


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Gene id
Species
Description
Chromosome
Strand