Anchorpoints

Gene id
AL8G01660
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL3G03760scaffold_3-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G46260disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;disease resistance protein (TIR-NBS-LRR class) family5-View
AT5G46270Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46260.1); Has 19108 Blast hits to 13517 proteins in 561 species: Archae - 10; Bacteria - 780; Metazoa - 1004; Fungi - 46; Plants - 16614; Viruses - 15; Other Eukaryotes - 639 (source: NCBI BLink).;Disease resistance protein (TIR-NBS-LRR class) family5-View
AT5G46450Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Disease resistance protein (TIR-NBS-LRR class) family5+View
AT5G46470Encodes RPS6 (RESISTANT TO P. SYRINGAE 6), a member of the TIR-NBS-LRR class resistance protein.;disease resistance protein (TIR-NBS-LRR class) family5+View
AT5G46490Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G31540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Disease resistance protein (TIR-NBS-LRR class) family5+View
AT5G46510Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Disease resistance protein (TIR-NBS-LRR class) family5+View
AT5G46520Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46510.1); Has 17530 Blast hits to 12991 proteins in 492 species: Archae - 6; Bacteria - 943; Metazoa - 980; Fungi - 57; Plants - 15109; Viruses - 15; Other Eukaryotes - 420 (source: NCBI BLink).;Disease resistance protein (TIR-NBS-LRR class) family5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G36210TMV resistance protein N (similar to)LG3-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM02G4534002Gm02+View
GM02G4535002Gm02+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G029930NBS-containing resistance-like protein (Fragment) (AHRD V1 *-*- C7A7K5_CORAV); contains Interpro domain(s) IPR002182 NB-ARC5+View
MT5G029950TMV resistance protein N (AHRD V1 ***- Q40392)5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G02810PACid=17548900;name=POPTR_0011s03000;alias=pta000033m;scaffold_11-View
PT19G02700PACid=17345798;name=POPTR_0019s02890;alias=pt010018m,Pt-LRR1.5,fgenesh4_pg.C_scaffold_117000018;scaffold_19+View
PT19G02710PACid=17328376;name=POPTR_0019s02900;alias=pt009584m;scaffold_19+View
PT19G02720PACid=17330735;name=POPTR_0019s02910;alias=pt010258m,fgenesh4_pg.C_scaffold_117000015;scaffold_19+View
PT19G02750PACid=17345398;name=POPTR_0019s02940;alias=pt010908m;scaffold_19+View
PT19G02760PACid=17332889;name=POPTR_0019s02950;alias=pt009734m;scaffold_19+View
PT19G02780PACid=17315834;name=POPTR_0019s02970;alias=pt010803m;scaffold_19+View
PT19G02800PACid=17316689;name=POPTR_0019s02990;alias=pt010925m;scaffold_19+View
PT19G02810PACid=17317064;name=POPTR_0019s03000;alias=pt009648m;scaffold_19+View
PT19G02820PACid=17318704;name=POPTR_0019s03010;alias=pt010800m;scaffold_19+View
PT19G02830PACid=17331642;name=POPTR_0019s03020;alias=pt010097m,Pt-LRR1.4,fgenesh4_pg.C_scaffold_1268000001;scaffold_19+View
PT19G02850PACid=17304988;name=POPTR_0019s03040;alias=pt009871m;scaffold_19+View


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Description
Chromosome
Strand