PLAZA v2.5 : colinear gene pairs

Anchorpoints

Gene id: AL6G14730
Organism: Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT3G01350	Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G14940.1); Has 5067 Blast hits to 4897 proteins in 853 species: Archae - 0; Bacteria - 1586; Metazoa - 472; Fungi - 442; Plants - 2170; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink).;Major facilitator superfamily protein	3	+	View
AT5G14940	Major facilitator superfamily protein; FUNCTIONS IN: amino acid transmembrane transporter activity, transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G01350.1); Has 5224 Blast hits to 5039 proteins in 856 species: Archae - 0; Bacteria - 1785; Metazoa - 536; Fungi - 394; Plants - 2164; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink).;Major facilitator superfamily protein	5	-	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00014G00780		supercontig_14	+	View

Fragaria vesca

Gene id	Description	Chromosome	Strand	Multiplicon
FV0G38010	Peptide transporter PTR5 (probable)	scf0513124	+	View

Glycine max

Gene id	Description	Chromosome	Strand	Multiplicon
GM13G04740	13	Gm13	-	View
GM19G01880	19	Gm19	-	View

Lotus japonicus

Gene id	Description	Chromosome	Strand	Multiplicon
LJ1G029000		chr1	+	View
LJ2G011120		chr2	-	View

Malus domestica

Gene id	Description	Chromosome	Strand	Multiplicon
MD17G003110		17	-	View

Medicago truncatula

Gene id	Description	Chromosome	Strand	Multiplicon
MT4G107580	Nitrate transporter NRT1-2 (AHRD V1 **** Q9FRU5_SOYBN); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region	4	-	View
MT4G107610	Peptide transporter PTR1 (AHRD V1 **** Q9M390); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region	4	-	View
MT4G107670	Nitrate transporter (NTL1) 53025-56402 (AHRD V1 **** Q9CAR8_ARATH); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region	4	+	View
MT6G008690	Peptide transporter family 2 (AHRD V1 **** Q17758); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region	6	-	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS06G13200	proton%2Ddependent oligopeptide transport, putative	6	-	View
OS06G13210	peptide transporter PTR2, putative, expressed	6	+	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_06G12740	source=BGI China;type=FgeneSH;	Chr06	-	View
OSINDICA_06G12750	source=BGI China;type=FgeneSH;	Chr06	-	View
OSINDICA_06G12760	source=BGI China;type=FgeneSH;	Chr06	+	View

Theobroma cacao

Gene id	Description	Chromosome	Strand	Multiplicon
TC04G007980		Tc04	-	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV14G12290	name=GSVIVG01032550001;	chr14	-	View