Anchorpoints

Gene id
AL5G24510
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL4G24030scaffold_4-View
AL4G24290scaffold_4-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G53960Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G37900.1); Has 6025 Blast hits to 5886 proteins in 1158 species: Archae - 0; Bacteria - 2442; Metazoa - 501; Fungi - 426; Plants - 2213; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink).;Major facilitator superfamily protein3-View
AT3G54140Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source;peptide transporter 13-View
AT3G54450Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72125.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Major facilitator superfamily protein3+View
AT2G37900Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G53960.1); Has 7031 Blast hits to 6882 proteins in 1319 species: Archae - 0; Bacteria - 3384; Metazoa - 508; Fungi - 445; Plants - 2220; Viruses - 0; Other Eukaryotes - 474 (source: NCBI BLink).;Major facilitator superfamily protein2-View
AT2G38100proton-dependent oligopeptide transport (POT) family protein; FUNCTIONS IN: amino acid transmembrane transporter activity, uracil transmembrane transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 2766 Blast hits to 2715 proteins in 326 species: Archae - 0; Bacteria - 547; Metazoa - 329; Fungi - 2; Plants - 1871; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).;proton-dependent oligopeptide transport (POT) family protein2-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00056G00390supercontig_56+View
CP00056G00450supercontig_56-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G12020Peptide transporter PTR5 (probable)LG6+View
FV6G12100Peptide transporter PTR1 (probable)LG6-View
FV7G28400Peptide transporter PTR1 (probable)LG7-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM03G1700003Gm03+View
GM03G1726003Gm03+View
GM01G2589001Gm01-View
GM07G1674007Gm07-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD01G0129401-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G09080PACid=17302217;name=POPTR_0006s09270;alias=pt017376m,fgenesh4_pm.C_LG_VI000312;scaffold_6+View
PT06G09120PACid=17337166;name=POPTR_0006s09310;alias=pt017372m,estExt_fgenesh4_pg.C_LG_VI0728;scaffold_6-View
PT16G09660PACid=17316567;name=POPTR_0016s10230;alias=pt002809m,estExt_fgenesh4_pm.C_LG_XVI0371;scaffold_16+View
PT16G09700PACid=17318071;name=POPTR_0016s10270;alias=pt002804m,fgenesh4_pm.C_LG_XVI000374;scaffold_16-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC05G003640Tc05+View
TC05G003700Tc05-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G04590name=GSVIVG01016458001;chr13-View
VV08G13760name=GSVIVG01034071001;chr8-View


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