Anchorpoints

Gene id
AL5G17270
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G48420Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G39970.1); Has 12560 Blast hits to 12559 proteins in 2179 species: Archae - 78; Bacteria - 10284; Metazoa - 135; Fungi - 145; Plants - 385; Viruses - 3; Other Eukaryotes - 1530 (source: NCBI BLink).;Haloacid dehalogenase-like hydrolase (HAD) superfamily protein3+View
AT3G48425DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808); BEST Arabidopsis thaliana protein match is: apurinic endonuclease-redox protein (TAIR:AT2G41460.1); Has 5913 Blast hits to 5912 proteins in 1998 species: Archae - 119; Bacteria - 3923; Metazoa - 218; Fungi - 82; Plants - 109; Viruses - 0; Other Eukaryotes - 1462 (source: NCBI BLink).;DNAse I-like superfamily protein3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G1832006Gm06-View
GM04G3660004Gm04+View
GM04G3661004Gm04+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME12794G00200scaffold12794+View
ME10899G00170scaffold10899+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT12G08810PACid=17318607;name=POPTR_0012s09380;alias=pt043849m;scaffold_12+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30147G0489030147-View
RC30147G0491030147+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC03G014080Tc03-View
TC03G014090Tc03+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G00310name=GSVIVG01007565001;chr17+View
VV17G00370name=GSVIVG01007572001;chr17-View


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Gene id
Species
Description
Chromosome
Strand