Anchorpoints
- Gene id
- AL5G17270
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G39970.1); Has 12560 Blast hits to 12559 proteins in 2179 species: Archae - 78; Bacteria - 10284; Metazoa - 135; Fungi - 145; Plants - 385; Viruses - 3; Other Eukaryotes - 1530 (source: NCBI BLink).;Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 3 + View AT3G48425 DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808); BEST Arabidopsis thaliana protein match is: apurinic endonuclease-redox protein (TAIR:AT2G41460.1); Has 5913 Blast hits to 5912 proteins in 1998 species: Archae - 119; Bacteria - 3923; Metazoa - 218; Fungi - 82; Plants - 109; Viruses - 0; Other Eukaryotes - 1462 (source: NCBI BLink).;DNAse I-like superfamily protein 3 + View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GM06G18320 06 Gm06 - View GM04G36600 04 Gm04 + View GM04G36610 04 Gm04 + View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME12794G00200 scaffold12794 + View ME10899G00170 scaffold10899 + View
Populus trichocarpa
Gene id
Description
Chromosome
Strand
Multiplicon
PT12G08810 PACid=17318607;name=POPTR_0012s09380;alias=pt043849m; scaffold_12 + View
Ricinus communis
Gene id
Description
Chromosome
Strand
Multiplicon
RC30147G04890 30147 - View RC30147G04910 30147 + View
Theobroma cacao
Gene id
Description
Chromosome
Strand
Multiplicon
TC03G014080 Tc03 - View TC03G014090 Tc03 + View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VV17G00310 name=GSVIVG01007565001; chr17 + View VV17G00370 name=GSVIVG01007572001; chr17 - View
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G48420 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G39970.1); Has 12560 Blast hits to 12559 proteins in 2179 species: Archae - 78; Bacteria - 10284; Metazoa - 135; Fungi - 145; Plants - 385; Viruses - 3; Other Eukaryotes - 1530 (source: NCBI BLink).;Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | 3 | + | View |
| AT3G48425 | DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808); BEST Arabidopsis thaliana protein match is: apurinic endonuclease-redox protein (TAIR:AT2G41460.1); Has 5913 Blast hits to 5912 proteins in 1998 species: Archae - 119; Bacteria - 3923; Metazoa - 218; Fungi - 82; Plants - 109; Viruses - 0; Other Eukaryotes - 1462 (source: NCBI BLink).;DNAse I-like superfamily protein | 3 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM06G18320 | 06 | Gm06 | - | View |
| GM04G36600 | 04 | Gm04 | + | View |
| GM04G36610 | 04 | Gm04 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME12794G00200 | scaffold12794 | + | View | |
| ME10899G00170 | scaffold10899 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT12G08810 | PACid=17318607;name=POPTR_0012s09380;alias=pt043849m; | scaffold_12 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30147G04890 | 30147 | - | View | |
| RC30147G04910 | 30147 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC03G014080 | Tc03 | - | View | |
| TC03G014090 | Tc03 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV17G00310 | name=GSVIVG01007565001; | chr17 | + | View |
| VV17G00370 | name=GSVIVG01007572001; | chr17 | - | View |