Anchorpoints

Gene id
AL4G15100
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G30470HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50┬ÁM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.;high-level expression of sugar-inducible gene 22-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00002G02790supercontig_2+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G31260B3 domain-containing protein Os07g0679700 (probable)LG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM14G3849014Gm14-View
GM18G0584018Gm18+View
GM11G3127011Gm11-View
GM02G4028002Gm02-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G0038803+View
MD11G00399011+View
MD11G00407011+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G075410B3 domain-containing transcription repressor VAL2 (AHRD V1 **** Q5CCK4); contains Interpro domain(s) IPR003340 Transcriptional factor B35-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT19G13930PACid=17324636;name=POPTR_0019s15070;alias=pt009676m;scaffold_19-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC09G035210Tc09-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G00380name=GSVIVG01024559001;chr6-View


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Gene id
Species
Description
Chromosome
Strand