Anchorpoints

Gene id
AL3G15850
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL8G02380scaffold_8-View
AL7G24270scaffold_7+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G18430RAB GTPase homolog A1E (RABA1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27831 Blast hits to 27775 proteins in 750 species: Archae - 32; Bacteria - 149; Metazoa - 14651; Fungi - 4104; Plants - 3007; Viruses - 20; Other Eukaryotes - 5868 (source: NCBI BLink).;RAB GTPase homolog A1E4-View
AT3G15060RAB GTPase homolog A1G (RABA1g); FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27884 Blast hits to 27831 proteins in 751 species: Archae - 32; Bacteria - 137; Metazoa - 14654; Fungi - 4198; Plants - 2964; Viruses - 20; Other Eukaryotes - 5879 (source: NCBI BLink).;RAB GTPase homolog A1G3+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00008G00840supercontig_8+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G17790Ras-related protein Rab11BLG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G2866012Gm12-View
GM13G3690013Gm13+View
GM13G3691013Gm13+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD05G0049505-View
MD10G02299010+View
MD11G02321011-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G37540PACid=17314041;name=POPTR_0001s38300;alias=pt040125m,Pt-RAB11.4,estExt_fgenesh4_pg.C_LG_I2926;scaffold_1-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC07G009100Tc07-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G02220name=GSVIVG01014250001;chr19+View
VV12G02380name=GSVIVG01020651001;chr12+View
VV12G02400name=GSVIVG01020653001;chr12+View


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Gene id
Species
Description
Chromosome
Strand