Anchorpoints
- Gene id
- AL3G15850
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
AT4G18430 RAB GTPase homolog A1E (RABA1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27831 Blast hits to 27775 proteins in 750 species: Archae - 32; Bacteria - 149; Metazoa - 14651; Fungi - 4104; Plants - 3007; Viruses - 20; Other Eukaryotes - 5868 (source: NCBI BLink).;RAB GTPase homolog A1E 4 - View AT3G15060 RAB GTPase homolog A1G (RABA1g); FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27884 Blast hits to 27831 proteins in 751 species: Archae - 32; Bacteria - 137; Metazoa - 14654; Fungi - 4198; Plants - 2964; Viruses - 20; Other Eukaryotes - 5879 (source: NCBI BLink).;RAB GTPase homolog A1G 3 + View
Carica papaya
Gene id
Description
Chromosome
Strand
Multiplicon
CP00008G00840 supercontig_8 + View
Fragaria vesca
Gene id
Description
Chromosome
Strand
Multiplicon
FV3G17790 Ras-related protein Rab11B LG3 + View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GM12G28660 12 Gm12 - View GM13G36900 13 Gm13 + View GM13G36910 13 Gm13 + View
Malus domestica
Gene id
Description
Chromosome
Strand
Multiplicon
MD05G004950 5 - View MD10G022990 10 + View MD11G023210 11 - View
Populus trichocarpa
Gene id
Description
Chromosome
Strand
Multiplicon
PT01G37540 PACid=17314041;name=POPTR_0001s38300;alias=pt040125m,Pt-RAB11.4,estExt_fgenesh4_pg.C_LG_I2926; scaffold_1 - View
Theobroma cacao
Gene id
Description
Chromosome
Strand
Multiplicon
TC07G009100 Tc07 - View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VV19G02220 name=GSVIVG01014250001; chr19 + View VV12G02380 name=GSVIVG01020651001; chr12 + View VV12G02400 name=GSVIVG01020653001; chr12 + View
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G18430 | RAB GTPase homolog A1E (RABA1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27831 Blast hits to 27775 proteins in 750 species: Archae - 32; Bacteria - 149; Metazoa - 14651; Fungi - 4104; Plants - 3007; Viruses - 20; Other Eukaryotes - 5868 (source: NCBI BLink).;RAB GTPase homolog A1E | 4 | - | View |
| AT3G15060 | RAB GTPase homolog A1G (RABA1g); FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27884 Blast hits to 27831 proteins in 751 species: Archae - 32; Bacteria - 137; Metazoa - 14654; Fungi - 4198; Plants - 2964; Viruses - 20; Other Eukaryotes - 5879 (source: NCBI BLink).;RAB GTPase homolog A1G | 3 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00008G00840 | supercontig_8 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV3G17790 | Ras-related protein Rab11B | LG3 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM12G28660 | 12 | Gm12 | - | View |
| GM13G36900 | 13 | Gm13 | + | View |
| GM13G36910 | 13 | Gm13 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD05G004950 | 5 | - | View | |
| MD10G022990 | 10 | + | View | |
| MD11G023210 | 11 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT01G37540 | PACid=17314041;name=POPTR_0001s38300;alias=pt040125m,Pt-RAB11.4,estExt_fgenesh4_pg.C_LG_I2926; | scaffold_1 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC07G009100 | Tc07 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV19G02220 | name=GSVIVG01014250001; | chr19 | + | View |
| VV12G02380 | name=GSVIVG01020651001; | chr12 | + | View |
| VV12G02400 | name=GSVIVG01020653001; | chr12 | + | View |