Anchorpoints

Gene id
AL3G07730
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL8G11500scaffold_8+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G07340basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink).;basic helix-loop-helix (bHLH) DNA-binding superfamily protein3-View
AT5G48560basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G07340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;basic helix-loop-helix (bHLH) DNA-binding superfamily protein5+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00008G00980supercontig_8+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G13760Transcription factor bHLH78 (bHLH 78) (probable)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G3256018Gm18+View
GM16G1062016Gm16+View
GM08G4604008Gm08+View
GM03G2177003Gm03-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD05G0166205-View
MD10G01143010+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06158G00410scaffold06158+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G012290BHLH transcription factor (AHRD V1 *-** B6UBF8_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS08G41320BHLH transcription factor, putative, expressed8+View
OS01G68700BHLH transcription factor, putative, expressed1-View
OS09G32510BHLH transcription factor, putative, expressed9-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_08G39910source=BGI China;type=FgeneSH;Chr08+View
OSINDICA_01G65280source=BGI China;type=FgeneSH;Chr01-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G24610PACid=17322629;name=POPTR_0002s24990;alias=pt020201m,eugene3.00002538;scaffold_2-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G0436903chr_3-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC01G021000Tc01+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G23160hypothetical protein LOC100382035 3+View


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Gene id
Species
Description
Chromosome
Strand