Anchorpoints

Gene id
AL3G03610
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL7G24920scaffold_7+View
AL6G18300scaffold_6-View
AL6G18330scaffold_6+View
AL8G01570scaffold_8-View
AL1G33830scaffold_1+View
AL1G34120scaffold_1-View
AL1G34210scaffold_1+View
AL1G34410scaffold_1-View
AL1G34600scaffold_1+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G04060NAC domain containing protein 46 (NAC046); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 87 (TAIR:AT5G18270.1); Has 3018 Blast hits to 3013 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3018; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;NAC domain containing protein 463-View
AT3G04070NAC domain containing protein 47 (NAC047); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC-like, activated by AP3/PI (TAIR:AT1G69490.1); Has 3042 Blast hits to 3035 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3042; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;NAC domain containing protein 473-View
AT4G17980NAC domain containing protein 71 (NAC071); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 96 (TAIR:AT5G46590.1); Has 2972 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2972; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;NAC domain containing protein 714-View
AT5G18270Arabidopsis NAC domain containing protein 87 (ANAC087); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 46 (TAIR:AT3G04060.1); Has 3027 Blast hits to 3020 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3027; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Arabidopsis NAC domain containing protein 875-View
AT5G46590NAC domain containing protein 96 (NAC096); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 71 (TAIR:AT4G17980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;NAC domain containing protein 965+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM16G0472016Gm16-View
GM16G0474016Gm16-View
GM19G2852019Gm19+View
GM16G2674016Gm16+View
GM16G2681016Gm16+View
GM02G0770002Gm02+View
GM02G0776002Gm02+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD14G00004014+View
MD12G00014012+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03614G02560scaffold03614-View
ME03614G02580scaffold03614-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G085220NAC domain transcription factor (AHRD V1 *-** B6U2D4_MAIZE); contains Interpro domain(s) IPR003441 No apical meristem (NAM) protein7+View
MT7G085260NAC domain protein (AHRD V1 **-- B2ZGR5_SOYBN); contains Interpro domain(s) IPR003441 No apical meristem (NAM) protein7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT19G04500PACid=17327840;name=POPTR_0019s04690;alias=pt010075m;scaffold_19+View
PT19G04520PACid=17342238;name=POPTR_0019s04710;alias=pt010022m;scaffold_19+View
PT13G04890PACid=17335893;name=POPTR_0013s05080;alias=pt030809m;scaffold_13+View
PT13G04920PACid=17341850;name=POPTR_0013s05110;alias=pt030768m;scaffold_13+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29950G0053029950-View
RC29950G0055029950-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC05G025020Tc05+View
TC05G025040Tc05-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G08190name=GSVIVG01033374001;chr8+View


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Gene id
Species
Description
Chromosome
Strand