Anchorpoints

Gene id
AL2G18200
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G26350scaffold_1-View
AL1G26390scaffold_1+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G69850Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.;nitrate transporter 1:21-View
AT1G69860Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.7 (TAIR:AT1G69870.1); Has 5388 Blast hits to 5286 proteins in 980 species: Archae - 0; Bacteria - 2151; Metazoa - 479; Fungi - 383; Plants - 2163; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).;Major facilitator superfamily protein1+View
AT1G69870Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate.;nitrate transporter 1.71+View
AT1G59740Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink).;Major facilitator superfamily protein1+View
AT1G27040Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1:2 (TAIR:AT1G69850.1); Has 5753 Blast hits to 5637 proteins in 1030 species: Archae - 0; Bacteria - 2265; Metazoa - 487; Fungi - 395; Plants - 2179; Viruses - 0; Other Eukaryotes - 427 (source: NCBI BLink).;Major facilitator superfamily protein1-View
AT1G27080Encodes a protein with low-affinity nitrate transporter activity that is expressed in the vascular tissue of the funiculus and the silique. This plasma membrane-localized enzyme is predicted to have 12 transmembrane domains. Plants lacking NRT1.6 have reduced levels of nitrate in their seeds and have increased levels of early embryonic developmental defects and seed abortion.;nitrate transporter 1.61+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00017G01690supercontig_17+View
CP00017G01700supercontig_17+View
CP00017G01710supercontig_17+View
CP00017G01810supercontig_17+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G06210Peptide transporter PTR2 (probable)scf0513158-View
FV0G06280Probable peptide transporter At1g52190scf0513158+View
FV5G13960Peptide transporter PTR2 (probable)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G0483001Gm01-View
GM01G0485001Gm01-View
GM01G0490001Gm01+View
GM18G1637018Gm18-View
GM18G1644018Gm18+View
GM18G1649018Gm18+View
GM08G4073008Gm08+View
GM08G4074008Gm08+View
GM05G0138005Gm05-View
GM05G0143005Gm05+View
GM05G0144005Gm05+View
GM05G0145005Gm05+View
GM17G1043017Gm17-View
GM17G1044017Gm17-View
GM17G1045017Gm17-View
GM17G1046017Gm17-View
GM17G1050017Gm17+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G00531013-View
MD16G00428016-View
MD16G00435016+View
MD16G00436016+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11495G00680scaffold11495-View
ME11495G00700scaffold11495-View
ME11495G00770scaffold11495+View
ME12794G01800scaffold12794+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT17G10940PACid=17308704;name=POPTR_0017s11320;alias=pt028966m;scaffold_17-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29736G0038029736-View
RC29736G0050029736+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC02G034120Tc02-View
TC02G034200Tc02+View
TC02G034220Tc02+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G12740name=GSVIVG01020076001;chr1+View
VV01G12800name=GSVIVG01020084001;chr1-View


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Gene id
Species
Description
Chromosome
Strand