Anchorpoints

Gene id
AL2G06560
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL8G29160scaffold_8-View
AL8G29200scaffold_8+View
AL1G26350scaffold_1-View
AL1G26390scaffold_1+View
AL1G19840scaffold_1+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G18880Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G62680.1); Has 4002 Blast hits to 3797 proteins in 617 species: Archae - 0; Bacteria - 698; Metazoa - 561; Fungi - 400; Plants - 2175; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink).;Major facilitator superfamily protein1+View
AT1G69850Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.;nitrate transporter 1:21-View
AT1G69860Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.7 (TAIR:AT1G69870.1); Has 5388 Blast hits to 5286 proteins in 980 species: Archae - 0; Bacteria - 2151; Metazoa - 479; Fungi - 383; Plants - 2163; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).;Major facilitator superfamily protein1+View
AT1G69870Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate.;nitrate transporter 1.71+View
AT1G59740Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink).;Major facilitator superfamily protein1+View
AT5G62680Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to karrikin; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G47960.1); Has 3769 Blast hits to 3614 proteins in 562 species: Archae - 0; Bacteria - 609; Metazoa - 518; Fungi - 366; Plants - 2162; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).;Major facilitator superfamily protein5-View
AT5G62730Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1:2 (TAIR:AT1G69850.1); Has 6918 Blast hits to 6790 proteins in 1275 species: Archae - 0; Bacteria - 3368; Metazoa - 483; Fungi - 402; Plants - 2165; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink).;Major facilitator superfamily protein5+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00005G02700supercontig_5-View
CP00005G02730supercontig_5+View
CP00005G02740supercontig_5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G0483001Gm01-View
GM01G0485001Gm01-View
GM01G0490001Gm01+View
GM18G1637018Gm18-View
GM18G1644018Gm18+View
GM18G1649018Gm18+View
GM02G0262002Gm02-View
GM02G0267002Gm02+View
GM02G0268002Gm02+View
GM08G4073008Gm08+View
GM08G4074008Gm08+View
GM05G0138005Gm05-View
GM05G0143005Gm05+View
GM05G0144005Gm05+View
GM05G0145005Gm05+View
GM17G1043017Gm17-View
GM17G1044017Gm17-View
GM17G1045017Gm17-View
GM17G1046017Gm17-View
GM17G1050017Gm17+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G00531013-View
MD16G00428016-View
MD16G00435016+View
MD16G00436016+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04209G00090scaffold04209-View
ME04209G00140scaffold04209+View
ME11495G00680scaffold11495-View
ME11495G00700scaffold11495-View
ME11495G00770scaffold11495+View
ME12794G01800scaffold12794+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30147G0732030147-View
RC30147G0733030147-View
RC30147G0742030147+View


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Gene id
Species
Description
Chromosome
Strand