Anchorpoints

Gene id
AL1G26020
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL2G18320scaffold_2+View
AL2G18390scaffold_2+View
AL2G18440scaffold_2+View
AL2G06240scaffold_2-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G70030Paired amphipathic helix (PAH2) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 4 (TAIR:AT1G70060.1); Has 1404 Blast hits to 650 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 520; Plants - 290; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).;Paired amphipathic helix (PAH2) superfamily protein1+View
AT1G70060Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).;SIN3-like 41+View
AT1G70090Encodes a protein with putative galacturonosyltransferase activity.;glucosyl transferase family 81+View
AT3G28340Encodes a protein with putative galacturonosyltransferase activity.;galacturonosyltransferase-like 103-View
AT1G59890SIN3-like 5 (SNL5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 6 (TAIR:AT1G10450.1).;SIN3-like 51+View
AT1G24170Encodes a protein with putative galacturonosyltransferase activity.;Nucleotide-diphospho-sugar transferases superfamily protein1-View
AT1G24190Enhances AtERF7-mediated transcriptional repression. RNAi lines show ABA hypersensitivity. Interacts with ERF7 and HDA19.;SIN3-like 31-View
AT1G24200Paired amphipathic helix (PAH2) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 3 (TAIR:AT1G24190.2); Has 1143 Blast hits to 637 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 451; Fungi - 381; Plants - 260; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).;Paired amphipathic helix (PAH2) superfamily protein1-View
AT1G24210Paired amphipathic helix (PAH2) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: Paired amphipathic helix (PAH2) superfamily protein (TAIR:AT1G27240.1); Has 593 Blast hits to 540 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 118; Plants - 237; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).;Paired amphipathic helix (PAH2) superfamily protein1-View
AT1G24220paired amphipathic helix repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: Paired amphipathic helix (PAH2) superfamily protein (TAIR:AT1G27240.1); Has 1794 Blast hits to 623 proteins in 172 species: Archae - 0; Bacteria - 12; Metazoa - 580; Fungi - 353; Plants - 743; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink).;paired amphipathic helix repeat-containing protein1-View
AT1G24230Paired amphipathic helix (PAH2) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: Paired amphipathic helix (PAH2) superfamily protein (TAIR:AT1G23810.1); Has 1242 Blast hits to 659 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 390; Fungi - 362; Plants - 421; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).;Paired amphipathic helix (PAH2) superfamily protein1-View
AT1G24250Paired amphipathic helix (PAH2) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: Paired amphipathic helix (PAH2) superfamily protein (TAIR:AT1G23810.1); Has 951 Blast hits to 563 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 221; Plants - 322; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).;Paired amphipathic helix (PAH2) superfamily protein1-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV4G22580Glycosyltransferase 8 domain-containing protein 1 (probable)LG4-View
FV4G22620Paired amphipathic helix protein Sin3 (AtSin3) (putative)LG4-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G1723018Gm18+View
GM02G0306002Gm02+View
GM02G0309002Gm02+View
GM08G4039008Gm08-View
GM08G4042008Gm08-View
GM01G0446001Gm01-View
GM01G0449001Gm01-View
GM13G0478013Gm13-View
GM13G0479013Gm13-View
GM19G0191019Gm19-View
GM19G0192019Gm19-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G017120chr2-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD17G00321017-View
MD09G0028409-View
MD09G0028609-View
MD16G00464016+View
MD16G00467016+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11495G01020scaffold11495+View
ME11495G01050scaffold11495+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G036580Glycosyltransferase CAZy family GT8 (AHRD V1 **-- B9HMR5_POPTR); contains Interpro domain(s) IPR002495 Glycosyl transferase, family 85-View
MT5G036670Paired amphipathic helix protein Sin3 (AHRD V1 *-*- O48686); contains Interpro domain(s) IPR013194 Histone deacetylase interacting5-View
MT5G036790Histone deacetylase complex SIN3 component (AHRD V1 **-- A9TE35_PHYPA); contains Interpro domain(s) IPR003822 Paired amphipathic helix5+View
MT5G036820Histone deacetylase complex SIN3 component (AHRD V1 ***- A9TE35_PHYPA); contains Interpro domain(s) IPR003822 Paired amphipathic helix5+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29736G0091029736+View
RC29736G0100029736-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G13190name=GSVIVG01020136001;chr1-View
VV01G13230name=GSVIVG01020141001;chr1-View


Download

Gene id
Species
Description
Chromosome
Strand