Anchorpoints
- Gene id
- AL1G21160
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
AT1G20080 SYTB; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: synaptotagmin A (TAIR:AT2G20990.1); Has 7272 Blast hits to 5651 proteins in 270 species: Archae - 0; Bacteria - 0; Metazoa - 4705; Fungi - 871; Plants - 1207; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink).;Calcium-dependent lipid-binding (CaLB domain) family protein 1 + View
Carica papaya
Gene id
Description
Chromosome
Strand
Multiplicon
CP00026G03100 supercontig_26 + View
Fragaria vesca
Gene id
Description
Chromosome
Strand
Multiplicon
FV2G38280 Extended synaptotagmin-1 (E-Syt1) (probable) LG2 + View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GM17G37850 17 Gm17 - View GM14G40290 14 Gm14 + View
Malus domestica
Gene id
Description
Chromosome
Strand
Multiplicon
MD12G014640 12 + View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME07012G00340 scaffold07012 + View
Populus trichocarpa
Gene id
Description
Chromosome
Strand
Multiplicon
PT05G25170 PACid=17320488;name=POPTR_0005s26310;alias=pt032623m,grail3.0002070502; scaffold_5 - View PT02G01940 PACid=17313564;name=POPTR_0002s02130;alias=pt022432m,estExt_fgenesh4_pg.C_LG_II0188; scaffold_2 + View PT09G13470 PACid=17344990;name=POPTR_0009s13660;alias=pt004403m,estExt_fgenesh4_pg.C_LG_IX0330; scaffold_9 - View
Ricinus communis
Gene id
Description
Chromosome
Strand
Multiplicon
RC30170G05670 30170 - View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VV03G04810 name=GSVIVG01024034001; chr3 - View VV18G10870 name=GSVIVG01009939001; chr18 - View VV18G10910 name=GSVIVG01009943001; chr18 - View
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G20080 | SYTB; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: synaptotagmin A (TAIR:AT2G20990.1); Has 7272 Blast hits to 5651 proteins in 270 species: Archae - 0; Bacteria - 0; Metazoa - 4705; Fungi - 871; Plants - 1207; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink).;Calcium-dependent lipid-binding (CaLB domain) family protein | 1 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00026G03100 | supercontig_26 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV2G38280 | Extended synaptotagmin-1 (E-Syt1) (probable) | LG2 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM17G37850 | 17 | Gm17 | - | View |
| GM14G40290 | 14 | Gm14 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD12G014640 | 12 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME07012G00340 | scaffold07012 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT05G25170 | PACid=17320488;name=POPTR_0005s26310;alias=pt032623m,grail3.0002070502; | scaffold_5 | - | View |
| PT02G01940 | PACid=17313564;name=POPTR_0002s02130;alias=pt022432m,estExt_fgenesh4_pg.C_LG_II0188; | scaffold_2 | + | View |
| PT09G13470 | PACid=17344990;name=POPTR_0009s13660;alias=pt004403m,estExt_fgenesh4_pg.C_LG_IX0330; | scaffold_9 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30170G05670 | 30170 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV03G04810 | name=GSVIVG01024034001; | chr3 | - | View |
| VV18G10870 | name=GSVIVG01009939001; | chr18 | - | View |
| VV18G10910 | name=GSVIVG01009943001; | chr18 | - | View |