Sub-family  

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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
rco
Ricinus communis (1 gene)



The gene family ORTHO021223 has 5 genes in 3 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 5 records out of 5 total, starting on record 1, ending on 5

gene_id species description comment strand chr outlier
AL6G27250 aly name=scaffold_602835.1;pid=910778;prot=eq;tid=942291 + scaffold_6 No
AL6G28370 aly name=fgenesh2_kg.6__2751__AT5G27070.1;pid=489617;prot=eq;tid=489617 - scaffold_6 No
AT5G26950 ath AGAMOUS-like 93 (AGL93); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 53 (TAIR:AT5G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;AGAMOUS-like 93 transcript=eq;prot=eq; - 5 No
AT5G27070 ath AGAMOUS-like 53 (AGL53); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: antipodal cell, central cell, endosperm; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 93 (TAIR:AT5G26950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;AGAMOUS-like 53 transcript=eq;prot=eq; + 5 No
RC28966G00120 rco name=28966.m000534;gene=28966.t000013;note=28966.t000013;transcript=eq;prot=eq - 28966 No
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