Sub-family 
- Id
- ORTHO019112
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000363
- Keywords
-
Overview of gene family content
- bdi
- Brachypodium distachyon (1 gene)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- zma
- Zea mays (2 genes)
The gene family ORTHO019112 has 6 genes in 5 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
View
- ...the multiple sequence alignment of the homologous gene family.
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
- ...the functional annotation associated with this gene family.
Index of genes with 1 constraints:
- gene family : ORTHO019112
Page 1 of 1, showing 6 records out of 6 total, starting on record 1, ending on 6
gene_id | species | description | comment | strand | chr | outlier |
---|---|---|---|---|---|---|
BD1G62400 | bdi | Glycosyl hydrolase (GH), subfamily GH14 | pid=Bradi1g62400.1;tid=Bradi1g62400.1;GeneName=Bradi1g62400;Name=BdGH14_4;transcript=eq;prot=eq | - | Bd1 | No |
OS03G22790 | osa | beta%2Damylase, putative, expressed | transcript=eq;prot=eq; | + | 3 | No |
OSINDICA_03G21990 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC006498; | + | Chr03 | No |
SB01G035370 | sbi | 1 | prot=eq;pid=5049422;tid=5049422 | - | chr_1 | No |
ZM01G15480 | zma | name=GRMZM2G347708;tid=GRMZM2G347708_T02;pid=GRMZM2G347708_P02;transcript=eq;prot=eq; | + | 1 | No | |
ZM01G15500 | zma | beta-amylase | name=GRMZM2G082034;tid=GRMZM2G082034_T01;pid=GRMZM2G082034_P01;transcript=eq;prot=eq; | + | 1 | No |
<< previous
next >>