Sub-family  

Parent family
HOM004512
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)



The gene family ORTHO018876 has 6 genes in 2 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 6 records out of 6 total, starting on record 1, ending on 6

gene_id species description comment strand chr outlier
AL7G37920 aly name=fgenesh2_kg.7__3412__AT5G41200.1;pid=493979;prot=eq;tid=493979 - scaffold_7 No
AL7G38480 aly name=scaffold_704060.1;pid=916318;prot=eq;tid=947831 + scaffold_7 No
AL7G38550 aly name=Al_scaffold_0007_3741;pid=860242;prot=eq;tid=891755 + scaffold_7 No
AT5G40120 ath AGAMOUS-like 76 (AGL76); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 75 (TAIR:AT5G41200.1); Has 652 Blast hits to 621 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 482; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink).;AGAMOUS-like 76 transcript=eq;prot=eq; + 5 No
AT5G40220 ath AGAMOUS-like 43 (AGL43); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 75 (TAIR:AT5G41200.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;AGAMOUS-like 43 transcript=eq;prot=eq; - 5 No
AT5G41200 ath AGAMOUS-like 75 (AGL75); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 43 (TAIR:AT5G40220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;AGAMOUS-like 75 transcript=eq;prot=eq; + 5 No
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