Sub-family  

Parent family
HOM001372
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (2 genes)
rco
Ricinus communis (2 genes)



The gene family ORTHO018756 has 6 genes in 4 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 1, showing 6 records out of 6 total, starting on record 1, ending on 6

gene_id species description comment strand chr outlier
AL1G10580 aly name=fgenesh2_kg.1__1131__AT1G10586.1;pid=471177;prot=eq;tid=471177 - scaffold_1 No
AT1G10586 ath basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G10585.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcript=eq;prot=eq; - 1 No
CP00069G00280 cpa name=evm.TU.supercontig_69.28;pid=evm.TU.supercontig_69.28;prot=eq;transcript=eq - supercontig_69 No
CP00069G00300 cpa name=evm.TU.supercontig_69.30;pid=evm.TU.supercontig_69.30;prot=eq;transcript=eq - supercontig_69 No
RC29631G00440 rco name=29631.m001038;gene=29631.t000045;note=29631.t000045;transcript=eq;prot=eq + 29631 No
RC29631G00450 rco name=29631.m001039;gene=29631.t000046;note=29631.t000046;transcript=eq;prot=eq + 29631 No
<< previous
next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier