Sub-family  

Parent family
HOM000067
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (7 genes)



The gene family ORTHO016603 has 8 genes in 2 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 1, showing 8 records out of 8 total, starting on record 1, ending on 8

gene_id species description comment strand chr outlier
AL7G29930 aly name=scaffold_703176.1;pid=915434;prot=eq;tid=946947 - scaffold_7 No
AT4G03440 ath Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03480.1); Has 18202 Blast hits to 9223 proteins in 460 species: Archae - 22; Bacteria - 1330; Metazoa - 10010; Fungi - 1278; Plants - 2395; Viruses - 41; Other Eukaryotes - 3126 (source: NCBI BLink).;Ankyrin repeat family protein transcript=eq;prot=eq; - 4 No
AT4G03450 ath Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03440.1); Has 22492 Blast hits to 11630 proteins in 488 species: Archae - 24; Bacteria - 1675; Metazoa - 12211; Fungi - 1719; Plants - 2554; Viruses - 43; Other Eukaryotes - 4266 (source: NCBI BLink).;Ankyrin repeat family protein transcript=eq;prot=eq; - 4 No
AT4G03470 ath Ankyrin repeat family protein; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT4G05040.4); Has 17879 Blast hits to 9120 proteins in 422 species: Archae - 19; Bacteria - 1109; Metazoa - 10141; Fungi - 1293; Plants - 2042; Viruses - 49; Other Eukaryotes - 3226 (source: NCBI BLink).;Ankyrin repeat family protein transcript=eq;prot=eq; - 4 No
AT4G03480 ath Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03440.1); Has 20363 Blast hits to 10320 proteins in 485 species: Archae - 23; Bacteria - 1523; Metazoa - 11338; Fungi - 1558; Plants - 2584; Viruses - 50; Other Eukaryotes - 3287 (source: NCBI BLink).;Ankyrin repeat family protein transcript=eq;prot=eq; - 4 No
AT4G05040 ath ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G14390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;ankyrin repeat family protein transcript=eq;prot=eq; + 4 No
AT4G14390 ath Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT4G14400.1); Has 23458 Blast hits to 11336 proteins in 519 species: Archae - 46; Bacteria - 1569; Metazoa - 13305; Fungi - 1747; Plants - 2323; Viruses - 62; Other Eukaryotes - 4406 (source: NCBI BLink).;Ankyrin repeat family protein transcript=eq;prot=eq; + 4 No
AT4G14400 ath encodes a novel protein with putative ankyrin and transmembrane regions. It is a member of one of the largest uncharacterized gene families in higher plants. The gene is involved in resistance to Pseudomonas syringae.;ankyrin repeat family protein transcript=eq;prot=eq; + 4 No
<< previous
next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier