Sub-family  

Parent family
HOM002787
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
mes
Manihot esculenta (2 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)



The gene family ORTHO016556 has 8 genes in 7 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 8 records out of 8 total, starting on record 1, ending on 8

gene_id species description comment strand chr outlier
AL4G25250 aly name=scaffold_402623.1;pid=903122;prot=eq;tid=934635 + scaffold_4 No
AT2G38830 ath Ubiquitin-conjugating enzyme/RWD-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein modification process, protein transport; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Tumour susceptibility gene 101 (InterPro:IPR008883), Steadiness box (InterPro:IPR017916); BEST Arabidopsis thaliana protein match is: ELCH-like (TAIR:AT5G13860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Ubiquitin-conjugating enzyme/RWD-like protein transcript=eq;prot=eq; + 2 No
CP00052G00760 cpa name=evm.TU.supercontig_52.77;pid=evm.TU.supercontig_52.77;prot=eq;transcript=eq - supercontig_52 No
ME11998G00290 mes PACid=17986258;RNAname=cassava4.1_022481m;GeneName=cassava4.1_022481m.g;transcript=eq;prot=eq - scaffold11998 No
ME11998G00310 mes PACid=17986263;RNAname=cassava4.1_026669m;GeneName=cassava4.1_026669m.g;transcript=eq;prot=eq - scaffold11998 No
PT02G04510 ptr PACid=17346043;name=POPTR_0002s04700;alias=pt022162m,fgenesh4_pg.C_LG_II000432; transcript=eq;prot=eq;protein_id=17346043; - scaffold_2 No
RC29883G00380 rco name=29883.m001983;gene=29883.t000038;note=29883.t000038;transcript=eq;prot=eq + 29883 No
TC00G023240 tca RNAname=Tc00_t023240;GeneName=Tc00_g023240;transcript=eq;prot=eq - Tc00 No
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