Sub-family  

Parent family
HOM000048
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
vvi
Vitis vinifera (2 genes)



The gene family ORTHO014086 has 12 genes in 9 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 12 records out of 12 total, starting on record 1, ending on 12

gene_id species description comment strand chr outlier
AL3G26820 aly name=fgenesh2_kg.3__2599__AT3G23880.1;pid=479898;prot=eq;tid=479898 - scaffold_3 No
AT3G23880 ath F-box and associated interaction domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G06240.1); Has 2315 Blast hits to 2300 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2313; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).;F-box and associated interaction domains-containing protein transcript=eq;prot=eq; - 3 No
GM13G28210 gma 13 pid=16291847;transcript=eq;prot=eq;name=Glyma13g28210.1 + Gm13 No
GM15G10840 gma 15 pid=16298363;transcript=eq;prot=eq;name=Glyma15g10840.1 - Gm15 No
LJ0G229570 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_074996;name=LjSGA_074996.2 + LjSGA_074996 No
LJ0G450360 lja prot=eq;transcript=eq;scaffold=LjT32D02;name=LjT32D02.40.nc - chr0 No
ME01551G02800 mes PACid=17962068;RNAname=cassava4.1_008049m;GeneName=cassava4.1_008049m.g;transcript=eq;prot=eq + scaffold01551 No
MT2G021150 mtr F-box/kelch-repeat protein At3g23880 (AHRD V1 ***- Q9LIR8); contains Interpro domain(s) IPR017451 F-box associated type 1 transcript=eq;prot=eq;pid=Medtr2g021150.1; - 2 No
PT08G20240 ptr PACid=17305259;name=POPTR_0008s20430;alias=pt027046m,eugene3.00081893; transcript=eq;prot=eq;protein_id=17305259; - scaffold_8 No
RC29726G00360 rco name=29726.m003924;gene=29726.t000036;note=29726.t000036;transcript=eq;prot=eq + 29726 No
VV18G14330 vvi name=GSVIVG01026026001; transcript=eq;prot=eq;name=GSVIVG01026026001;pid=GSVIVG01026026001;tid=GSVIVT01026026001; - chr18 No
VV18G14340 vvi name=GSVIVG01026027001; transcript=eq;prot=eq;name=GSVIVG01026027001;pid=GSVIVG01026027001;tid=GSVIVT01026027001; - chr18 No
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