Sub-family  

Parent family
HOM000016
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (3 genes)
cpa
Carica papaya (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO013606 has 13 genes in 9 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 13 records out of 13 total, starting on record 1, ending on 13

gene_id species description comment strand chr outlier
AL5G20250 aly name=fgenesh2_kg.5__1412__AT3G50740.1;pid=485420;prot=eq;tid=485420 - scaffold_5 No
AL8G33950 aly name=fgenesh2_kg.8__2748__AT5G26310.1;pid=496932;prot=eq;tid=496932 - scaffold_8 No
AT3G50740 ath UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.;UDP-glucosyl transferase 72E1 transcript=eq;prot=eq; - 3 No
AT5G26310 ath UGT72E3 is an UDPG:coniferyl alcohol glucosyltransferase which glucosylates sinapyl- and coniferyl alcohol as well as sinapic acid. The enzyme is thought to be involved in lignin- and phenylpropanoid metabolism. A knockdown mutant line (72E3KD) was obtained using RNAi silencing. No reduction in coniferyl alcohol 4-O-glucoside and sinapyl alcohol 4-O-glucoside was detected in this line compared to wildtype, in contrast with the knockdown line constructed for UGT72E2 displayed a twofold reduction in the these phenylpropanoid 4-O-glucosides.;UDP-Glycosyltransferase superfamily protein transcript=eq;prot=eq; + 5 No
AT5G66690 ath UGT72E2 is an UDPG:coniferyl alcohol glucosyltransferase which glucosylates sinapyl- and coniferyl aldehydes as well as sinapyl- and coniferyl alcohol. The enzyme is thought to be involved in lignin metabolism. A knockdown mutant line (72E2KD) was obtained using RNAi silencing. A twofold reduction in coniferyl alcohol 4-O-glucoside and sinapyl alcohol 4-O-glucoside was detected in this line compared to wildtype. In comparison, both knockout and knockdown lines of UGT72E1 and UGT72E3, respectively, failed to display the same reduction in phenylpropanoid 4-O-glucosides.;UDP-Glycosyltransferase superfamily protein transcript=eq;prot=eq; + 5 No
CP00158G00110 cpa name=evm.TU.supercontig_158.11;pid=evm.TU.supercontig_158.11;prot=eq;transcript=eq + supercontig_158 No
GM01G38430 gma 01 pid=16245603;transcript=eq;prot=eq;name=Glyma01g38430.1 - Gm01 No
GM11G06880 gma 11 pid=16282942;transcript=eq;prot=eq;name=Glyma11g06880.1 + Gm11 No
LJ0G037390 lja prot=eq;transcript=eq;scaffold=LjSGA_015919;name=LjSGA_015919.1 + LjSGA_015919 No
MT5G019580 mtr UDP-glucuronosyltransferase 1-6 (AHRD V1 *-*- P19224); contains Interpro domain(s) IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase transcript=eq;prot=eq;pid=Medtr5g019580.1; + 5 No
PT07G11830 ptr PACid=17319937;name=POPTR_0007s12400;alias=pt025266m,eugene3.00071041; transcript=eq;prot=eq;protein_id=17319937; + scaffold_7 No
TC01G003650 tca RNAname=Tc01_t003650;GeneName=Tc01_g003650;transcript=eq;prot=eq - Tc01 No
VV04G02650 vvi name=GSVIVG01019017001; transcript=eq;prot=eq;name=GSVIVG01019017001;pid=GSVIVG01019017001;tid=GSVIVT01019017001; + chr4 No
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