Sub-family  

Parent family
HOM000069
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO013594 has 13 genes in 13 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 13 records out of 13 total, starting on record 1, ending on 13

gene_id species description comment strand chr outlier
AL5G01570 aly name=fgenesh2_kg.5__150__AT2G02400.1;pid=484158;prot=eq;tid=484158 - scaffold_5 No
AT2G02400 ath NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G58490.1); Has 17462 Blast hits to 17447 proteins in 2524 species: Archae - 423; Bacteria - 8786; Metazoa - 654; Fungi - 1071; Plants - 2738; Viruses - 70; Other Eukaryotes - 3720 (source: NCBI BLink).;NAD(P)-binding Rossmann-fold superfamily protein transcript=eq;prot=eq; - 2 No
CP00246G00140 cpa name=evm.TU.supercontig_246.14;pid=evm.TU.supercontig_246.14;prot=eq;transcript=eq - supercontig_246 No
GM15G13120 gma 15 pid=16298622;transcript=eq;prot=eq;name=Glyma15g13120.1 - Gm15 No
LJ6G015400 lja prot=eq;transcript=eq;scaffold=CM0066;name=chr6.CM0066.270.nc + chr6 No
MD08G023180 mdo transcript=eq;prot=eq;pid=MDP0000202437;tid=MDP0000202437;contig=MDC012535.425 + 8 No
ME07402G00050 mes PACid=17971533;RNAname=cassava4.1_011551m;GeneName=cassava4.1_011551m.g;transcript=eq;prot=eq + scaffold07402 No
MT2G028620 mtr Dihydroflavonol-4-reductase (AHRD V1 **** P51102); contains Interpro domain(s) IPR016040 NAD(P)-binding domain transcript=eq;prot=eq;pid=Medtr2g028620.1; - 2 No
OS01G74660 osa dihydroflavonol%2D4%2Dreductase, putative, expressed transcript=eq;prot=eq; + 1 No
OSINDICA_00G23360 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFSC047996; - Scaffold006904 No
RC30063G00230 rco name=30063.m001419;gene=30063.t000023;note=30063.t000023;transcript=eq;prot=eq + 30063 No
TC00G089100 tca RNAname=Tc00_t089100;GeneName=Tc00_g089100;transcript=eq;prot=eq - Tc00 No
VV12G06200 vvi name=GSVIVG01023116001; transcript=eq;prot=eq;name=GSVIVG01023116001;pid=GSVIVG01023116001;tid=GSVIVT01023116001; + chr12 No
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