Sub-family  

Parent family
HOM000284
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
gma
Glycine max (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO013593 has 13 genes in 11 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 1, showing 13 records out of 13 total, starting on record 1, ending on 13

gene_id species description comment strand chr outlier
AL5G01420 aly name=fgenesh1_pm.C_scaffold_5000105;pid=322561;prot=eq;tid=322561 - scaffold_5 No
AT2G02240 ath maternal effect embryo arrest 66 (MEE66); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;F-box family protein transcript=eq;prot=eq; - 2 No
CP00053G01560 cpa name=evm.TU.supercontig_53.156;pid=evm.TU.supercontig_53.156;prot=eq;transcript=eq + supercontig_53 No
GM20G36230 gma 20 pid=16318044;transcript=eq;prot=eq;name=Glyma20g36230.1 - Gm20 No
MD00G410260 mdo transcript=eq;prot=eq;pid=MDP0000154049;tid=MDP0000154049;contig=MDC018666.179 + MDC018666.179 No
MD12G024830 mdo transcript=eq;prot=eq;pid=MDP0000321902;tid=MDP0000321902;contig=MDC018666.236 + 12 No
ME02264G00610 mes PACid=17993247;RNAname=cassava4.1_012495m;GeneName=cassava4.1_012495m.g;transcript=eq;prot=eq + scaffold02264 No
MT1G079140 mtr F-box protein PP2-B1 (AHRD V1 ***- Q6NPT8); contains Interpro domain(s) IPR001810 Cyclin-like F-box transcript=eq;prot=eq;pid=Medtr1g079140.1; - 1 No
PT06G26570 ptr PACid=17325975;name=POPTR_0006s28280;alias=pt018333m; transcript=eq;prot=eq;protein_id=17325975; + scaffold_6 No
PT18G02690 ptr PACid=17315991;name=POPTR_0018s02880;alias=pt008856m,fgenesh4_pm.C_LG_XVIII000187; transcript=eq;prot=eq;protein_id=17315991; + scaffold_18 No
RC30128G03910 rco name=30128.m009004;gene=30128.t000465;note=30128.t000465;transcript=eq;prot=eq - 30128 No
TC00G071780 tca RNAname=Tc00_t071780;GeneName=Tc00_g071780;transcript=eq;prot=eq + Tc00 No
VV00G08040 vvi name=GSVIVG01003907001; transcript=eq;prot=eq;name=GSVIVG01003907001;pid=GSVIVG01003907001;tid=GSVIVT01003907001; + chrUn No
<< previous
next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier