Sub-family  

Parent family
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO013544 has 13 genes in 11 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 13 records out of 13 total, starting on record 1, ending on 13

gene_id species description comment strand chr outlier
AL3G02190 aly name=fgenesh2_kg.3__244__AT3G02970.1;pid=477543;prot=eq;tid=477543 - scaffold_3 No
AT3G02970 ath EXORDIUM like 6 (EXL6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: Phosphate-responsive 1 family protein (TAIR:AT1G35140.1); Has 398 Blast hits to 398 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 398; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;EXORDIUM like 6 transcript=eq;prot=eq; - 3 No
CP00043G00930 cpa name=evm.TU.supercontig_43.93;pid=evm.TU.supercontig_43.93;prot=eq;transcript=eq - supercontig_43 No
FV7G33730 fve Collagen alpha-5(IV) chain, Precursor (probable) transcript=eq;prot=eq;pid=gene12567 - LG7 No
GM04G00590 gma 04 pid=16254356;transcript=eq;prot=eq;name=Glyma04g00590.1 + Gm04 No
GM06G00660 gma 06 pid=16261248;transcript=eq;prot=eq;name=Glyma06g00660.1 + Gm06 No
MD01G023320 mdo transcript=eq;prot=eq;pid=MDP0000574942;tid=MDP0000574942;contig=MDC002312.232 + 1 No
MD07G021440 mdo transcript=eq;prot=eq;pid=MDP0000279567;tid=MDP0000279567;contig=MDC007839.76 + 7 No
ME03614G01040 mes PACid=17965693;RNAname=cassava4.1_025312m;GeneName=cassava4.1_025312m.g;transcript=eq;prot=eq + scaffold03614 No
PT13G07590 ptr PACid=17307823;name=POPTR_0013s07780;alias=pt030926m,eugene3.00130798; transcript=eq;prot=eq;protein_id=17307823; + scaffold_13 No
RC30073G00870 rco name=30073.m002280;gene=30073.t000090;note=30073.t000090;transcript=eq;prot=eq + 30073 No
TC05G022150 tca RNAname=Tc05_t022150;GeneName=Tc05_g022150;transcript=eq;prot=eq - Tc05 No
VV16G05590 vvi name=GSVIVG01024374001; transcript=eq;prot=eq;name=GSVIVG01024374001;pid=GSVIVG01024374001;tid=GSVIVT01024374001; - chr16 No
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