Sub-family  

Parent family
HOM001821
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mtr
Medicago truncatula (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO013522 has 13 genes in 9 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 13 records out of 13 total, starting on record 1, ending on 13

gene_id species description comment strand chr outlier
AL2G17860 aly name=fgenesh2_kg.2__1226__AT1G69610.1;pid=476096;prot=eq;tid=476096 + scaffold_2 No
AT1G69610 ath FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: N-terminal protein myristoylation, translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT5G39785.1); Has 289 Blast hits to 276 proteins in 65 species: Archae - 3; Bacteria - 18; Metazoa - 43; Fungi - 27; Plants - 92; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink).;Protein of unknown function (DUF1666) transcript=eq;prot=eq; + 1 No
CP00128G00220 cpa name=evm.TU.supercontig_128.22;pid=evm.TU.supercontig_128.22;prot=eq;transcript=eq - supercontig_128 No
FV0G05560 fve Interaptin (probable) transcript=eq;prot=eq;pid=gene04746 - scf0513158 No
GM01G05820 gma 01 pid=16243538;transcript=eq;prot=eq;name=Glyma01g05820.1 + Gm01 No
GM02G11930 gma 02 pid=16247786;transcript=eq;prot=eq;name=Glyma02g11930.1 - Gm02 No
GM07G35770 gma 07 pid=16268852;transcript=eq;prot=eq;name=Glyma07g35770.1 + Gm07 No
GM20G04910 gma 20 pid=16315517;transcript=eq;prot=eq;name=Glyma20g04910.1 + Gm20 No
LJ0G422570 lja partial;prot=eq;transcript=eq;scaffold=LjT46I09;name=LjT46I09.120.nd - chr0 No
MD00G335680 mdo transcript=eq;prot=eq;pid=MDP0000295804;tid=MDP0000295804;contig=MDC014221.239 + MDC014221.239 No
MD16G003860 mdo transcript=eq;prot=eq;pid=MDP0000296098;tid=MDP0000296098;contig=MDC014221.227 - 16 No
MT5G040600 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR012870 Protein of unknown function DUF1666 transcript=eq;prot=eq;pid=Medtr5g040600.1; - 5 No
VV01G12090 vvi name=GSVIVG01019984001; transcript=eq;prot=eq;name=GSVIVG01019984001;pid=GSVIVG01019984001;tid=GSVIVT01019984001; - chr1 No
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