Sub-family  

Parent family
HOM001562
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO013481 has 13 genes in 10 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 13 records out of 13 total, starting on record 1, ending on 13

gene_id species description comment strand chr outlier
AL0G07360 aly name=fgenesh2_kg.301__1__AT2G40080.1;pid=497391;prot=eq;tid=497391 + scaffold_301 No
AL4G26730 aly name=scaffold_402775.1;pid=903274;prot=eq;tid=934787 - scaffold_4 No
AT2G40080 ath Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes.;Protein of unknown function (DUF1313) transcript=eq;prot=eq; - 2 No
GM11G35270 gma 11 pid=16285458;transcript=eq;prot=eq;name=Glyma11g35270.1 + Gm11 No
GM18G03130 gma 18 pid=16307768;transcript=eq;prot=eq;name=Glyma18g03130.1 - Gm18 No
LJ0G266000 lja prot=eq;transcript=eq;scaffold=LjSGA_089359;name=LjSGA_089359.1.1 - LjSGA_089359 No
ME08265G03220 mes PACid=17988746;RNAname=cassava4.1_019555m;GeneName=cassava4.1_019555m.g;transcript=eq;prot=eq + scaffold08265 No
ME10689G00820 mes PACid=17983167;RNAname=cassava4.1_019488m;GeneName=cassava4.1_019488m.g;transcript=eq;prot=eq - scaffold10689 No
MT3G070490 mtr Early flowering 4 (AHRD V1 ***- Q52ZI3_PEA); contains Interpro domain(s) IPR009741 Protein of unknown function DUF1313 transcript=eq;prot=eq;pid=Medtr3g070490.1; + 3 No
PT08G06630 ptr PACid=17323886;name=POPTR_0008s06820;alias=pt028170m,fgenesh4_pg.C_LG_VIII000583,Pt-ELF4.1; transcript=eq;prot=eq;protein_id=17323886; + scaffold_8 No
RC28833G00050 rco name=28833.m000156;gene=28833.t000005;note=28833.t000005;transcript=eq;prot=eq + 28833 No
TC10G001550 tca RNAname=Tc10_t001550;GeneName=Tc10_g001550;transcript=eq;prot=eq - Tc10 No
VV13G10470 vvi name=GSVIVG01032821001; transcript=eq;prot=eq;name=GSVIVG01032821001;pid=GSVIVG01032821001;tid=GSVIVT01032821001; + chr13 No
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