Sub-family  

Parent family
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO013087 has 14 genes in 11 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 14 records out of 14 total, starting on record 1, ending on 14

gene_id species description comment strand chr outlier
AL6G06990 aly name=scaffold_600726.1;pid=908669;prot=eq;tid=940182 + scaffold_6 No
AT5G07240 ath IQ-domain 24 (IQD24); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 23 (TAIR:AT5G62070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;IQ-domain 24 transcript=eq;prot=eq; + 5 No
CP00107G00210 cpa name=evm.TU.supercontig_107.21;pid=evm.TU.supercontig_107.21;prot=eq;transcript=eq + supercontig_107 No
GM10G38310 gma 10 pid=16281387;transcript=eq;prot=eq;name=Glyma10g38310.1 - Gm10 No
GM20G29550 gma 20 pid=16317272;transcript=eq;prot=eq;name=Glyma20g29550.1 + Gm20 No
MD01G018860 mdo transcript=eq;prot=eq;pid=MDP0000240376;tid=MDP0000240376;contig=MDC010602.60 + 1 No
MD07G018150 mdo transcript=eq;prot=eq;pid=MDP0000626149;tid=MDP0000626149;contig=MDC002995.336 + 7 No
ME11425G00340 mes PACid=17985573;RNAname=cassava4.1_007168m;GeneName=cassava4.1_007168m.g;transcript=eq;prot=eq - scaffold11425 No
MT1G101330 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR000048 IQ calmodulin-binding region transcript=eq;prot=eq;pid=Medtr1g101330.1; - 1 No
PT12G12590 ptr PACid=17312941;name=POPTR_0012s13350;alias=pt015967m; transcript=eq;prot=eq;protein_id=17312941; + scaffold_12 No
PT15G12350 ptr PACid=17331958;name=POPTR_0015s13300;alias=pt000766m; transcript=eq;prot=eq;protein_id=17331958; + scaffold_15 No
RC30147G00480 rco name=30147.m014291;gene=30147.t000562;note=30147.t000562;transcript=eq;prot=eq - 30147 No
TC03G019560 tca RNAname=Tc03_t019560;GeneName=Tc03_g019560;transcript=eq;prot=eq - Tc03 No
VV16G00520 vvi name=GSVIVG01010604001; transcript=eq;prot=eq;name=GSVIVG01010604001;pid=GSVIVG01010604001;tid=GSVIVT01010604001; + chr16 No
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