Sub-family  

Parent family
HOM000402
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mtr
Medicago truncatula (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO013014 has 14 genes in 12 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 1, showing 14 records out of 14 total, starting on record 1, ending on 14

gene_id species description comment strand chr outlier
AL4G06820 aly name=fgenesh1_pg.C_scaffold_4000503;pid=344161;prot=eq;tid=344161 + scaffold_4 No
AL7G09030 aly name=fgenesh2_kg.7__914__AT4G32440.2;pid=491481;prot=eq;tid=491481 - scaffold_7 No
AT4G32440 ath Plant Tudor-like RNA-binding protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Plant Tudor-like protein (TAIR:AT2G25590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Plant Tudor-like RNA-binding protein transcript=eq;prot=eq; + 4 No
BD3G07670 bdi pid=Bradi3g07670.1;tid=Bradi3g07670.1;GeneName=Bradi3g07670;transcript=eq;prot=eq + Bd3 No
CP00427G00010 cpa name=evm.TU.supercontig_427.1;pid=evm.TU.supercontig_427.1;prot=eq;transcript=eq + supercontig_427 No
FV2G40550 fve Protein EMSY (probable) transcript=eq;prot=eq;pid=gene11691 + LG2 No
GM04G07330 gma 04 pid=16255172;transcript=eq;prot=eq;name=Glyma04g07330.1 + Gm04 No
GM06G07390 gma 06 pid=16262055;transcript=eq;prot=eq;name=Glyma06g07390.1 + Gm06 No
LJ1G021850 lja prot=eq;transcript=eq;scaffold=CM0442;name=chr1.CM0442.320.nd - chr1 No
MD00G361620 mdo transcript=eq;prot=eq;pid=MDP0000304352;tid=MDP0000304352;contig=MDC016233.176 - MDC016233.176 No
MT3G107680 mtr RNA binding protein (AHRD V1 *-*- B6T9D3_MAIZE); contains Interpro domain(s) IPR005491 ENT transcript=eq;prot=eq;pid=Medtr3g107680.1; + 3 No
OSINDICA_02G10580 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC012917; + Chr02 No
PT06G24970 ptr PACid=17310457;name=POPTR_0006s26680;alias=pt017916m,fgenesh4_pg.C_LG_VI001776; transcript=eq;prot=eq;protein_id=17310457; - scaffold_6 No
VV04G11740 vvi name=GSVIVG01035806001; transcript=eq;prot=eq;name=GSVIVG01035806001;pid=GSVIVG01035806001;tid=GSVIVT01035806001; - chr4 No
<< previous
next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier