Sub-family  

Parent family
HOM000072
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO012972 has 14 genes in 13 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 1, showing 14 records out of 14 total, starting on record 1, ending on 14

gene_id species description comment strand chr outlier
AL2G22180 aly name=scaffold_202267.1;pid=895193;prot=eq;tid=926706 + scaffold_2 No
AT1G73340 ath Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G50660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Cytochrome P450 superfamily protein transcript=eq;prot=eq; + 1 No
CP00628G00040 cpa name=evm.TU.supercontig_628.4;pid=evm.TU.supercontig_628.4;prot=eq;transcript=eq - supercontig_628 No
FV5G15230 fve Cytochrome P450 720B1 (PtAO) (probable) transcript=eq;prot=eq;pid=gene08968 - LG5 No
GM09G28970 gma 09 pid=16276564;transcript=eq;prot=eq;name=Glyma09g28970.1 + Gm09 No
GM16G33560 gma 16 pid=16303752;transcript=eq;prot=eq;name=Glyma16g33560.1 + Gm16 No
LJ2G005320 lja prot=eq;transcript=eq;scaffold=LjT16L14;name=chr2.LjT16L14.30.nc + chr2 No
MD14G022990 mdo transcript=eq;prot=eq;pid=MDP0000196263;tid=MDP0000196263;contig=MDC013714.195 + 14 No
ME09619G00130 mes PACid=17975502;RNAname=cassava4.1_025006m;GeneName=cassava4.1_025006m.g;transcript=eq;prot=eq - scaffold09619 No
MT6G069000 mtr Cytochrome P450 (AHRD V1 ***- B9N9I5_POPTR); contains Interpro domain(s) IPR002401 Cytochrome P450, E-class, group I transcript=eq;prot=eq;pid=Medtr6g069000.1; - 6 No
PT17G03330 ptr PACid=17336363;name=POPTR_0017s03520;alias=pt029078m,eugene3.01840036,CYP720A1; transcript=eq;prot=eq;protein_id=17336363; + scaffold_17 No
RC30172G00070 rco name=30172.m000208;gene=30172.t000007;note=30172.t000007;transcript=eq;prot=eq - 30172 No
TC00G085780 tca RNAname=Tc00_t085780;GeneName=Tc00_g085780;transcript=eq;prot=eq - Tc00 No
VV16G04650 vvi name=GSVIVG01024242001; transcript=eq;prot=eq;name=GSVIVG01024242001;pid=GSVIVG01024242001;tid=GSVIVT01024242001; - chr16 No
<< previous
next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier