Sub-family  

Parent family
HOM000837
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO012701 has 15 genes in 12 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 15 records out of 15 total, starting on record 1, ending on 15

gene_id species description comment strand chr outlier
AT5G62520 ath Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.;similar to RCD one 5 transcript=eq;prot=eq; + 5 No
CP00076G00560 cpa name=evm.TU.supercontig_76.56;pid=evm.TU.supercontig_76.56;prot=eq;transcript=eq + supercontig_76 No
FV5G06190 fve Poly [ADP-ribose] polymerase 14 (PARP-14) (probable) transcript=eq;prot=eq;pid=gene32186 - LG5 No
GM04G35560 gma 04 pid=16256848;transcript=eq;prot=eq;name=Glyma04g35560.1 + Gm04 No
GM05G02210 gma 05 pid=16258040;transcript=eq;prot=eq;name=Glyma05g02210.1 - Gm05 No
GM17G09720 gma 17 pid=16305009;transcript=eq;prot=eq;name=Glyma17g09720.1 + Gm17 No
LJ0G056410 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_020622;name=LjSGA_020622.2 + LjSGA_020622 No
MD06G014230 mdo transcript=eq;prot=eq;pid=MDP0000697620;tid=MDP0000697620;contig=MDC004401.181 + 6 No
ME04083G00050 mes PACid=17991868;RNAname=cassava4.1_010987m;GeneName=cassava4.1_010987m.g;transcript=eq;prot=eq + scaffold04083 No
MT3G077870 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR011009 Protein kinase-like transcript=eq;prot=eq;pid=Medtr3g077870.1; + 3 No
PT12G07680 ptr PACid=17320449;name=POPTR_0012s08250;alias=pt015945m; transcript=eq;prot=eq;protein_id=17320449; - scaffold_12 No
PT15G07810 ptr PACid=17341870;name=POPTR_0015s08760;alias=pt000944m; transcript=eq;prot=eq;protein_id=17341870; - scaffold_15 No
RC30147G06200 rco name=30147.m013947;gene=30147.t000218;note=30147.t000218;transcript=eq;prot=eq + 30147 No
TC03G001250 tca RNAname=Tc03_t001250;GeneName=Tc03_g001250;transcript=eq;prot=eq - Tc03 No
VV17G01780 vvi name=GSVIVG01007754001; transcript=eq;prot=eq;name=GSVIVG01007754001;pid=GSVIVG01007754001;tid=GSVIVT01007754001; + chr17 No
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