Sub-family  

Parent family
HOM004823
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO012656 has 15 genes in 13 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 15 records out of 15 total, starting on record 1, ending on 15

gene_id species description comment strand chr outlier
AL7G38940 aly name=fgenesh2_kg.7__3480__AT5G39380.1;pid=494047;prot=eq;tid=494047 + scaffold_7 No
AT5G39380 ath Plant calmodulin-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT5G15430.1); Has 1562 Blast hits to 1366 proteins in 187 species: Archae - 0; Bacteria - 45; Metazoa - 751; Fungi - 101; Plants - 192; Viruses - 10; Other Eukaryotes - 463 (source: NCBI BLink).;Plant calmodulin-binding protein-related transcript=eq;prot=eq; - 5 No
CP00014G01450 cpa name=evm.TU.supercontig_14.145;pid=evm.TU.supercontig_14.145;prot=eq;transcript=eq + supercontig_14 No
FV6G43270 fve Myb-like protein V (probable) transcript=eq;prot=eq;pid=gene04345 - LG6 No
GM13G05890 gma 13 pid=16289788;transcript=eq;prot=eq;name=Glyma13g05890.1 + Gm13 No
GM19G03400 gma 19 pid=16311768;transcript=eq;prot=eq;name=Glyma19g03400.1 + Gm19 No
LJ2G012020 lja prot=eq;transcript=eq;scaffold=LjT16J19;name=chr2.LjT16J19.70.nc - chr2 No
MD09G004390 mdo transcript=eq;prot=eq;pid=MDP0000157865;tid=MDP0000157865;contig=MDC001371.254 + 9 No
MD17G004850 mdo transcript=eq;prot=eq;pid=MDP0000376617;tid=MDP0000376617;contig=MDC002719.93 + 17 No
ME06609G00480 mes PACid=17983535;RNAname=cassava4.1_003317m;GeneName=cassava4.1_003317m.g;transcript=eq;prot=eq - scaffold06609 No
MT6G013790 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR012417 Calmodulin-binding, plant transcript=eq;prot=eq;pid=Medtr6g013790.1; + 6 No
PT17G12220 ptr PACid=17337622;name=POPTR_0017s12600;alias=pt028896m,grail3.0059010401; transcript=eq;prot=eq;protein_id=17337622; + scaffold_17 No
RC29630G00040 rco name=29630.m000779;gene=29630.t000004;note=29630.t000004;transcript=eq;prot=eq + 29630 No
TC04G010070 tca RNAname=Tc04_t010070;GeneName=Tc04_g010070;transcript=eq;prot=eq + Tc04 No
VV14G02820 vvi name=GSVIVG01011491001; transcript=eq;prot=eq;name=GSVIVG01011491001;pid=GSVIVG01011491001;tid=GSVIVT01011491001; + chr14 No
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