Sub-family  

Parent family
HOM000072
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO012625 has 15 genes in 13 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 15 records out of 15 total, starting on record 1, ending on 15

gene_id species description comment strand chr outlier
AL7G04440 aly name=fgenesh2_kg.7__432__AT4G36380.1;pid=490999;prot=eq;tid=490999 + scaffold_7 No
AT4G36380 ath Encodes a cytochrome P-450 gene that is involved in leaf blade expansion by controlling polar cell expansion in the leaf length direction. Member of the CYP90C CYP450 family. ROT3 was shown to be involved in brassinosteroid biosynthesis, most likely in the conversion step of typhasterol (TY) to castasterone (CS). As 6-deoxo-CS was unable to restore the phenotype of rot3-1, it has been postulated that ROT3 might be specifically involved in the conversion of TY to CS in the C6-oxidation pathway of brassinolide. Recently, CYP90C1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates).;Cytochrome P450 superfamily protein transcript=eq;prot=eq; - 4 No
CP00006G01830 cpa name=evm.TU.supercontig_6.184;pid=evm.TU.supercontig_6.184;prot=eq;transcript=eq + supercontig_6 No
FV1G14300 fve Cytochrome P450 90C1 (similar to) transcript=eq;prot=eq;pid=gene14904 + LG1 No
GM01G37510 gma 01 pid=16245487;transcript=eq;prot=eq;name=Glyma01g37510.1 + Gm01 No
GM11G07780 gma 11 pid=16283050;transcript=eq;prot=eq;name=Glyma11g07780.1 - Gm11 No
LJ2G023020 lja prot=eq;transcript=eq;scaffold=CM0249;name=chr2.CM0249.430.nc + chr2 No
MD00G339160 mdo transcript=eq;prot=eq;pid=MDP0000242569;tid=MDP0000242569;contig=MDC015120.230 - MDC015120.230 No
MD02G011950 mdo transcript=eq;prot=eq;pid=MDP0000303875;tid=MDP0000303875;contig=MDC017910.361 + 2 No
ME06512G00580 mes PACid=17966442;RNAname=cassava4.1_028377m;GeneName=cassava4.1_028377m.g;transcript=eq;prot=eq + scaffold06512 No
MT5G021220 mtr Cytochrome P450 90C1 (AHRD V1 ***- Q9M066); contains Interpro domain(s) IPR002403 Cytochrome P450, E-class, group IV transcript=eq;prot=eq;pid=Medtr5g021220.1; - 5 No
PT07G12950 ptr PACid=17327823;name=POPTR_0007s13520;alias=pt025224m,Pt-ROT3.1,fgenesh4_pm.C_LG_VII000450; transcript=eq;prot=eq;protein_id=17327823; + scaffold_7 No
RC29634G00050 rco name=29634.m002059;gene=29634.t000005;note=29634.t000005;transcript=eq;prot=eq - 29634 No
TC01G002410 tca RNAname=Tc01_t002410;GeneName=Tc01_g002410;transcript=eq;prot=eq - Tc01 No
VV04G01350 vvi name=GSVIVG01018857001; transcript=eq;prot=eq;name=GSVIVG01018857001;pid=GSVIVG01018857001;tid=GSVIVT01018857001; + chr4 No
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