Sub-family  

Parent family
HOM000241
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO012499 has 15 genes in 11 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 15 records out of 15 total, starting on record 1, ending on 15

gene_id species description comment strand chr outlier
AL3G39430 aly name=fgenesh2_kg.3__3446__AT2G18370.1;pid=480745;prot=eq;tid=480745 + scaffold_3 No
AT2G18370 ath Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein transcript=eq;prot=eq; + 2 No
CP00228G00230 cpa name=evm.TU.supercontig_228.23;pid=evm.TU.supercontig_228.23;prot=eq;transcript=eq + supercontig_228 No
GM08G17190 gma 08 pid=16271455;transcript=eq;prot=eq;name=Glyma08g17190.1 - Gm08 No
GM15G42000 gma 15 pid=16300787;transcript=eq;prot=eq;name=Glyma15g42000.1 + Gm15 No
MD00G032370 mdo transcript=eq;prot=eq;pid=MDP0000235841;tid=MDP0000235841;contig=MDC001359.360 + MDC001359.360 No
MD00G507970 mdo transcript=eq;prot=eq;pid=MDP0000316925;tid=MDP0000316925;contig=MDC029728.22 + MDC029728.22 No
ME05378G00050 mes PACid=17987942;RNAname=cassava4.1_019513m;GeneName=cassava4.1_019513m.g;transcript=eq;prot=eq - scaffold05378 No
MT2G062600 mtr Non-specific lipid-transfer protein (AHRD V1 ***- C6SXS2_SOYBN); contains Interpro domain(s) IPR013770 Plant lipid transfer protein and hydrophobic protein, helical transcript=eq;prot=eq;pid=Medtr2g062600.1; + 2 No
PT01G23160 ptr PACid=17344581;name=POPTR_0001s23920;alias=pt040974m; transcript=eq;prot=eq;protein_id=17344581; + scaffold_1 No
PT01G23180 ptr PACid=17318276;name=POPTR_0001s23940;alias=pt040879m,grail3.0148004401; transcript=eq;prot=eq;protein_id=17318276; + scaffold_1 No
PT09G02830 ptr PACid=17336766;name=POPTR_0009s03020;alias=pt005396m; transcript=eq;prot=eq;protein_id=17336766; + scaffold_9 No
RC29616G00020 rco name=29616.m000215;gene=29616.t000002;note=29616.t000002;transcript=eq;prot=eq - 29616 No
TC03G023690 tca RNAname=Tc03_t023690;GeneName=Tc03_g023690;transcript=eq;prot=eq - Tc03 No
VV13G01510 vvi name=GSVIVG01006001001; transcript=eq;prot=eq;name=GSVIVG01006001001;pid=GSVIVG01006001001;tid=GSVIVT01006001001; + chr13 No
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