Sub-family 
- Id
- ORTHO012395
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM002449
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (2 genes)
- ath
- Arabidopsis thaliana (2 genes)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (2 genes)
- mdo
- Malus domestica (1 gene)
- mes
- Manihot esculenta (2 genes)
- mtr
- Medicago truncatula (1 gene)
- ptr
- Populus trichocarpa (1 gene)
- rco
- Ricinus communis (1 gene)
- tca
- Theobroma cacao (1 gene)
The gene family ORTHO012395 has 15 genes in 11 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO012395
Page 1 of 1, showing 15 records out of 15 total, starting on record 1, ending on 15
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL1G25520 | aly | name=fgenesh2_kg.1__2587__AT1G23710.1;pid=472633;prot=eq;tid=472633 | + | scaffold_1 | No | |
| AL2G18930 | aly | name=fgenesh2_kg.2__1292__AT1G70420.1;pid=476162;prot=eq;tid=476162 | - | scaffold_2 | No | |
| AT1G23710 | ath | Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G70420.1); Has 288 Blast hits to 282 proteins in 52 species: Archae - 0; Bacteria - 6; Metazoa - 16; Fungi - 11; Plants - 191; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).;Protein of unknown function (DUF1645) | transcript=eq;prot=eq; | + | 1 | No |
| AT1G70420 | ath | Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G23710.1); Has 179 Blast hits to 179 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).;Protein of unknown function (DUF1645) | transcript=eq;prot=eq; | - | 1 | No |
| CP00069G00450 | cpa | name=evm.TU.supercontig_69.45;pid=evm.TU.supercontig_69.45;prot=eq;transcript=eq | + | supercontig_69 | No | |
| FV4G21650 | fve | Cyclin-dependent kinase inhibitor 2A, isoform 4 (probable) | transcript=eq;prot=eq;pid=gene00637 | + | LG4 | No |
| GM01G03700 | gma | 01 | pid=16243301;transcript=eq;prot=eq;name=Glyma01g03700.1 | + | Gm01 | No |
| GM02G04000 | gma | 02 | pid=16246905;transcript=eq;prot=eq;name=Glyma02g04000.1 | - | Gm02 | No |
| MD13G006590 | mdo | transcript=eq;prot=eq;pid=MDP0000648218;tid=MDP0000648218;contig=MDC012539.194 | - | 13 | No | |
| ME03823G00050 | mes | PACid=17992840;RNAname=cassava4.1_013215m;GeneName=cassava4.1_013215m.g;transcript=eq;prot=eq | - | scaffold03823 | No | |
| ME05378G00030 | mes | PACid=17987952;RNAname=cassava4.1_012940m;GeneName=cassava4.1_012940m.g;transcript=ne;prot=eq | + | scaffold05378 | No | |
| MT5G034230 | mtr | Unknown Protein (AHRD V1); contains Interpro domain(s) IPR012442 Protein of unknown function DUF1645 | transcript=eq;prot=eq;pid=Medtr5g034230.1; | + | 5 | No |
| PT10G03960 | ptr | PACid=17320024;name=POPTR_0010s05100;alias=pt012515m; | transcript=eq;prot=eq;protein_id=17320024; | - | scaffold_10 | No |
| RC29631G00340 | rco | name=29631.m001028;gene=29631.t000035;note=29631.t000035;transcript=eq;prot=eq | + | 29631 | No | |
| TC02G023720 | tca | RNAname=Tc02_t023720;GeneName=Tc02_g023720;transcript=eq;prot=eq | - | Tc02 | No |
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