Sub-family  

Parent family
HOM002449
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)



The gene family ORTHO012395 has 15 genes in 11 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 15 records out of 15 total, starting on record 1, ending on 15

gene_id species description comment strand chr outlier
AL1G25520 aly name=fgenesh2_kg.1__2587__AT1G23710.1;pid=472633;prot=eq;tid=472633 + scaffold_1 No
AL2G18930 aly name=fgenesh2_kg.2__1292__AT1G70420.1;pid=476162;prot=eq;tid=476162 - scaffold_2 No
AT1G23710 ath Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G70420.1); Has 288 Blast hits to 282 proteins in 52 species: Archae - 0; Bacteria - 6; Metazoa - 16; Fungi - 11; Plants - 191; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).;Protein of unknown function (DUF1645) transcript=eq;prot=eq; + 1 No
AT1G70420 ath Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G23710.1); Has 179 Blast hits to 179 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).;Protein of unknown function (DUF1645) transcript=eq;prot=eq; - 1 No
CP00069G00450 cpa name=evm.TU.supercontig_69.45;pid=evm.TU.supercontig_69.45;prot=eq;transcript=eq + supercontig_69 No
FV4G21650 fve Cyclin-dependent kinase inhibitor 2A, isoform 4 (probable) transcript=eq;prot=eq;pid=gene00637 + LG4 No
GM01G03700 gma 01 pid=16243301;transcript=eq;prot=eq;name=Glyma01g03700.1 + Gm01 No
GM02G04000 gma 02 pid=16246905;transcript=eq;prot=eq;name=Glyma02g04000.1 - Gm02 No
MD13G006590 mdo transcript=eq;prot=eq;pid=MDP0000648218;tid=MDP0000648218;contig=MDC012539.194 - 13 No
ME03823G00050 mes PACid=17992840;RNAname=cassava4.1_013215m;GeneName=cassava4.1_013215m.g;transcript=eq;prot=eq - scaffold03823 No
ME05378G00030 mes PACid=17987952;RNAname=cassava4.1_012940m;GeneName=cassava4.1_012940m.g;transcript=ne;prot=eq + scaffold05378 No
MT5G034230 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR012442 Protein of unknown function DUF1645 transcript=eq;prot=eq;pid=Medtr5g034230.1; + 5 No
PT10G03960 ptr PACid=17320024;name=POPTR_0010s05100;alias=pt012515m; transcript=eq;prot=eq;protein_id=17320024; - scaffold_10 No
RC29631G00340 rco name=29631.m001028;gene=29631.t000035;note=29631.t000035;transcript=eq;prot=eq + 29631 No
TC02G023720 tca RNAname=Tc02_t023720;GeneName=Tc02_g023720;transcript=eq;prot=eq - Tc02 No
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