Sub-family  

Parent family
HOM000437
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO012159 has 16 genes in 15 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 16 records out of 16 total, starting on record 1, ending on 16

gene_id species description comment strand chr outlier
AT4G33500 ath Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G16580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Protein phosphatase 2C family protein transcript=eq;prot=eq; - 4 No
BD3G25590 bdi phosphoprotein phosphatase activity (Blast2GO) pid=Bradi3g25590.1;tid=Bradi3g25590.1;GeneName=Bradi3g25590;transcript=eq;prot=eq + Bd3 No
FV5G41790 fve Probable protein phosphatase 2C BIPP2C1 (OsBIPP2C1) (similar to) transcript=eq;prot=eq;pid=gene16094 - LG5 No
GM15G05780 gma 15 pid=16297771;transcript=eq;prot=eq;name=Glyma15g05780.1 - Gm15 No
LJ6G019150 lja prot=eq;transcript=eq;scaffold=CM0314;name=chr6.CM0314.320.nc + chr6 No
MD00G288030 mdo transcript=eq;prot=eq;pid=MDP0000241422;tid=MDP0000241422;contig=MDC012314.241 + MDC012314.241 No
MD02G008150 mdo transcript=eq;prot=eq;pid=MDP0000232807;tid=MDP0000232807;contig=MDC001313.262 - 2 No
ME08003G00110 mes PACid=17967967;RNAname=cassava4.1_006573m;GeneName=cassava4.1_006573m.g;transcript=eq;prot=eq + scaffold08003 No
MT2G008590 mtr Protein phosphatase (Fragment) (AHRD V1 *-*- B4X9B1_SORBI); contains Interpro domain(s) IPR010822 Sporulation stage II, protein E C-terminal transcript=eq;prot=eq;pid=Medtr2g008590.1; - 2 No
OS10G22460 osa expressed protein transcript=eq;prot=eq; - 10 No
OSINDICA_10G14260 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC030521; - Chr10 No
PP00217G00010 ppa NULL name=estExt_fgenesh1_pg.C_2170001,pid=169691,prot=eq,tid=169691 + scaffold_217 No
RC28509G00030 rco name=28509.m000093;gene=28509.t000003;note=28509.t000003;transcript=eq;prot=eq - 28509 No
TC02G012050 tca RNAname=Tc02_t012050;GeneName=Tc02_g012050;transcript=eq;prot=eq + Tc02 No
VV12G08820 vvi name=GSVIVG01029794001; transcript=eq;prot=eq;name=GSVIVG01029794001;pid=GSVIVG01029794001;tid=GSVIVT01029794001; + chr12 No
ZM05G12020 zma LOC100285253;LOC100285253 name=GRMZM2G071087;tid=GRMZM2G071087_T01;pid=GRMZM2G071087_P01;gpm564;transcript=eq;prot=eq; + 5 No
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