Sub-family  

Parent family
HOM002023
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO012039 has 16 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 16 records out of 16 total, starting on record 1, ending on 16

gene_id species description comment strand chr outlier
AL6G32220 aly name=scaffold_603334.1;pid=911277;prot=eq;tid=942790 - scaffold_6 No
AT4G10000 ath Thioredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione S-transferase, N-terminal (InterPro:IPR004045); BEST Arabidopsis thaliana protein match is: Thioredoxin family protein (TAIR:AT5G03880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Thioredoxin family protein transcript=eq;prot=eq; - 4 No
BD5G11290 bdi pid=Bradi5g11290.1;tid=Bradi5g11290.1;GeneName=Bradi5g11290;transcript=eq;prot=eq - Bd5 No
FV5G24870 fve Prostaglandin E synthase 2 (mPGES-2) (probable) transcript=eq;prot=eq;pid=gene27078 + LG5 No
GM04G43520 gma 04 pid=16257773;transcript=eq;prot=eq;name=Glyma04g43520.1 - Gm04 No
LJ3G019530 lja partial;prot=eq;transcript=eq;scaffold=CM0129;name=chr3.CM0129.250.nd - chr3 No
ME03827G00040 mes PACid=17966585;RNAname=cassava4.1_019454m;GeneName=cassava4.1_019454m.g;transcript=eq;prot=eq - scaffold03827 No
MRCC299_04G02490 mrcc299 name=fgenesh2_pg.C_Chr_04000169;pid=99974;prot=eq;tid=99974;transcript=eq - Chr_04 No
MT3G005720 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR004045 Glutathione S-transferase, N-terminal transcript=eq;prot=eq;pid=Medtr3g005720.1; - 3 No
OSINDICA_04G28670 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC017653; + Chr04 No
PP00114G00420 ppa NULL name=e_gw1.114.88.1,pid=134631,prot=eq,tid=134631 - scaffold_114 No
PT13G09690 ptr PACid=17315168;name=POPTR_0013s10260;alias=pt030846m,gw1.41.577.1; transcript=eq;prot=eq;protein_id=17315168; - scaffold_13 No
SB06G017640 sbi 6 prot=eq;pid=5041887;tid=5041887 + chr_6 No
SM00014G04370 smo proteinId=411345;transcriptId=411345;name=fgenesh2_pg.C_scaffold_14000398;transcript=eq;prot=eq - scaffold_14 No
TC00G002050 tca RNAname=Tc00_t002050;GeneName=Tc00_g002050;transcript=eq;prot=eq + Tc00 No
VV00G23650 vvi name=GSVIVG01036436001; transcript=eq;prot=eq;name=GSVIVG01036436001;pid=GSVIVG01036436001;tid=GSVIVT01036436001; + chr18_random No
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