Sub-family  

Parent family
HOM000288
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO012016 has 16 genes in 14 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 16 records out of 16 total, starting on record 1, ending on 16

gene_id species description comment strand chr outlier
AL6G10570 aly name=fgenesh2_kg.6__1049__AT5G10820.1;pid=487915;prot=eq;tid=487915 - scaffold_6 No
AT5G10820 ath Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G79710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; - 5 No
BD4G30580 bdi pid=Bradi4g30580.1;tid=Bradi4g30580.1;GeneName=Bradi4g30580;transcript=eq;prot=eq + Bd4 No
GM14G11670 gma 14 pid=16295194;transcript=eq;prot=eq;name=Glyma14g11670.1 - Gm14 No
GM17G34120 gma 17 pid=16306994;transcript=eq;prot=eq;name=Glyma17g34120.1 + Gm17 No
LJ5G006390 lja prot=eq;transcript=eq;scaffold=CM0345;name=chr5.CM0345.60.nc + chr5 No
ME00847G02420 mes PACid=17985953;RNAname=cassava4.1_032861m;GeneName=cassava4.1_032861m.g;transcript=eq;prot=eq + scaffold00847 No
MT1G014220 mtr Folate-Biopterin Transporter (FBT) family (AHRD V1 *-** D0N259_PHYIN); contains Interpro domain(s) IPR004324 Biopterin transport-related protein BT1 transcript=eq;prot=eq;pid=Medtr1g014220.1; + 1 No
OS09G25560 osa BT1 family protein, putative, expressed transcript=eq;prot=eq; + 9 No
OSINDICA_09G19570 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC028796; + Chr09 No
PT06G26420 ptr PACid=17317348;name=POPTR_0006s28130;alias=pt017659m,gw1.VI.226.1; transcript=eq;prot=eq;protein_id=17317348; + scaffold_6 No
PT18G02530 ptr PACid=17322520;name=POPTR_0018s02720;alias=pt008442m; transcript=eq;prot=eq;protein_id=17322520; + scaffold_18 No
SB02G025050 sbi 2 prot=eq;pid=5051202;tid=5051202 + chr_2 No
TC09G001330 tca RNAname=Tc09_t001330;GeneName=Tc09_g001330;transcript=eq;prot=eq - Tc09 No
VV04G13250 vvi name=GSVIVG01035983001; transcript=eq;prot=eq;name=GSVIVG01035983001;pid=GSVIVG01035983001;tid=GSVIVT01035983001; + chr4 No
ZM07G14570 zma name=GRMZM2G142924;tid=GRMZM2G142924_T01;pid=GRMZM2G142924_P01;transcript=ne;prot=eq; + 7 No
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