Sub-family  

Parent family
HOM002081
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO011981 has 16 genes in 14 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 16 records out of 16 total, starting on record 1, ending on 16

gene_id species description comment strand chr outlier
AL5G13770 aly name=scaffold_501429.1;pid=905725;prot=eq;tid=937238 + scaffold_5 No
AT3G45620 ath This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase;Transducin/WD40 repeat-like superfamily protein transcript=eq;prot=eq; + 3 No
CP00139G00590 cpa name=evm.TU.supercontig_139.59;pid=evm.TU.supercontig_139.59;prot=eq;transcript=eq - supercontig_139 No
FV0G52570 fve WD repeat-containing protein 42A (probable) transcript=eq;prot=eq;pid=gene32754 + scf0510687 No
FV3G30020 fve WD repeat-containing protein 42A (probable) transcript=eq;prot=eq;pid=gene25341 - LG3 No
GM13G40440 gma 13 pid=16293283;transcript=eq;prot=eq;name=Glyma13g40440.1 + Gm13 No
GM15G04960 gma 15 pid=16297674;transcript=eq;prot=eq;name=Glyma15g04960.1 - Gm15 No
LJ3G011720 lja prot=eq;transcript=eq;scaffold=CM0196;name=chr3.CM0196.200.nc - chr3 No
ME03750G00550 mes PACid=17980897;RNAname=cassava4.1_006974m;GeneName=cassava4.1_006974m.g;transcript=eq;prot=eq - scaffold03750 No
MRCC299_06G03120 mrcc299 name=EuGene.0600010320;pid=59318;prot=eq;tid=59318;transcript=eq + Chr_06 No
MT2G093200 mtr DDB1- and CUL4-associated factor 8 (AHRD V1 ***- Q8N7N5); contains Interpro domain(s) IPR017986 WD40 repeat, region transcript=eq;prot=eq;pid=Medtr2g093200.1; - 2 No
OS03G17780 osa WD domain, G%2Dbeta repeat domain containing protein, expressed transcript=eq;prot=eq; + 3 No
RC29688G00070 rco name=29688.m000260;gene=29688.t000007;note=29688.t000007;transcript=eq;prot=eq + 29688 No
SB01G038680 sbi 1 prot=eq;pid=5049651;tid=5049651 - chr_1 No
VV06G04760 vvi name=GSVIVG01025114001; transcript=eq;prot=eq;name=GSVIVG01025114001;pid=GSVIVG01025114001;tid=GSVIVT01025114001; + chr6 No
ZM01G12050 zma name=GRMZM2G179411;tid=GRMZM2G179411_T01;pid=GRMZM2G179411_P01;transcript=eq;prot=eq; + 1 No
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