Sub-family  

Parent family
HOM002487
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO011972 has 16 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 16 records out of 16 total, starting on record 1, ending on 16

gene_id species description comment strand chr outlier
AL5G04110 aly name=scaffold_500438.1;pid=904734;prot=eq;tid=936247 + scaffold_5 No
AT3G25680 ath FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23890.1); Has 2454 Blast hits to 2065 proteins in 355 species: Archae - 39; Bacteria - 284; Metazoa - 1081; Fungi - 166; Plants - 264; Viruses - 45; Other Eukaryotes - 575 (source: NCBI BLink). transcript=eq;prot=eq; + 3 No
BD1G42520 bdi motor activity, ATPase activity (Blast2GO) pid=Bradi1g42520.1;tid=Bradi1g42520.1;GeneName=Bradi1g42520;transcript=eq;prot=eq + Bd1 No
CP29023G00020 cpa name=evm.TU.contig_29023.2;pid=evm.TU.contig_29023.2;prot=eq;transcript=eq - contig_29023 No
GM01G22630 gma 01 pid=16244250;transcript=eq;prot=eq;name=Glyma01g22630.1 - Gm01 No
LJ2G013430 lja partial;prot=eq;transcript=eq;scaffold=CM0749;name=chr2.CM0749.260.nd + chr2 No
ME08359G00630 mes PACid=17968994;RNAname=cassava4.1_004403m;GeneName=cassava4.1_004403m.g;transcript=eq;prot=eq - scaffold08359 No
MT5G053260 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr5g053260.1; + 5 No
OS06G30390 osa oxidoreductase%2F transition metal ion binding protein, putative, expressed transcript=eq;prot=eq; + 6 No
OSINDICA_06G27010 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC010843; + Chr06 No
PT10G12950 ptr PACid=17331148;name=POPTR_0010s14090;alias=pt011515m,gw1.X.389.1; transcript=eq;prot=eq;protein_id=17331148; - scaffold_10 No
RC29738G00350 rco name=29738.m001033;gene=29738.t000035;note=29738.t000035;transcript=eq;prot=eq + 29738 No
SB10G013060 sbi 10 prot=eq;pid=5061711;tid=5061711 - chr_10 No
TC02G034700 tca RNAname=Tc02_t034700;GeneName=Tc02_g034700;transcript=eq;prot=eq - Tc02 No
VV01G08340 vvi name=GSVIVG01011967001; transcript=eq;prot=eq;name=GSVIVG01011967001;pid=GSVIVG01011967001;tid=GSVIVT01011967001; + chr1 No
ZM06G18370 zma name=GRMZM2G125054;tid=GRMZM2G125054_T01;pid=GRMZM2G125054_P01;transcript=eq;prot=eq; - 6 No
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