Sub-family  

Parent family
HOM001424
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)



The gene family ORTHO011920 has 16 genes in 10 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 16 records out of 16 total, starting on record 1, ending on 16

gene_id species description comment strand chr outlier
AL3G39780 aly name=fgenesh1_pm.C_scaffold_3002827;pid=319811;prot=eq;tid=319811 + scaffold_3 No
AT2G18630 ath Protein of unknown function (DUF677); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, peroxisome, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66675.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Protein of unknown function (DUF677) transcript=eq;prot=eq; + 2 No
FV5G37870 fve UPF0496 protein At4g34320 (putative) transcript=eq;prot=eq;pid=gene29520 - LG5 No
GM02G06600 gma 02 pid=16247200;transcript=eq;prot=eq;name=Glyma02g06600.1 + Gm02 No
GM16G25650 gma 16 pid=16302880;transcript=eq;prot=eq;name=Glyma16g25650.1 + Gm16 No
MD00G115540 mdo transcript=eq;prot=eq;pid=MDP0000165783;tid=MDP0000165783;contig=MDC004925.239 - MDC004925.239 No
MD00G263210 mdo transcript=eq;prot=eq;pid=MDP0000286055;tid=MDP0000286055;contig=MDC011298.251 + MDC011298.251 No
MD00G336640 mdo transcript=eq;prot=eq;pid=MDP0000196107;tid=MDP0000196107;contig=MDC015017.267 - MDC015017.267 No
MD02G013270 mdo transcript=eq;prot=eq;pid=MDP0000802715;tid=MDP0000802715;contig=MDC002458.1852 + 2 No
ME08148G00020 mes PACid=17975867;RNAname=cassava4.1_027556m;GeneName=cassava4.1_027556m.g;transcript=ne;prot=eq + scaffold08148 No
ME09260G00320 mes PACid=17981125;RNAname=cassava4.1_009340m;GeneName=cassava4.1_009340m.g;transcript=eq;prot=eq + scaffold09260 No
MT8G078100 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR007749 Protein of unknown function DUF677 transcript=eq;prot=eq;pid=Medtr8g078100.1; + 8 No
PT05G12680 ptr PACid=17324956;name=POPTR_0005s12870;alias=pt033083m,fgenesh4_pm.C_scaffold_57000105; transcript=eq;prot=eq;protein_id=17324956; + scaffold_5 No
PT07G11750 ptr PACid=17322146;name=POPTR_0007s12320;alias=pt025460m,gw1.VII.3327.1; transcript=eq;prot=eq;protein_id=17322146; - scaffold_7 No
RC29646G00050 rco name=29646.m001057;gene=29646.t000005;note=29646.t000005;transcript=eq;prot=eq - 29646 No
TC01G003750 tca RNAname=Tc01_t003750;GeneName=Tc01_g003750;transcript=eq;prot=eq + Tc01 No
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