Sub-family  

Parent family
HOM000971
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO011800 has 16 genes in 12 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 16 records out of 16 total, starting on record 1, ending on 16

gene_id species description comment strand chr outlier
AL1G26200 aly name=scaffold_102784.1;pid=889990;prot=eq;tid=921503 + scaffold_1 No
AT1G27210 ath ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G59850.1); Has 516 Blast hits to 439 proteins in 115 species: Archae - 2; Bacteria - 40; Metazoa - 93; Fungi - 74; Plants - 195; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).;ARM repeat superfamily protein transcript=eq;prot=eq; - 1 No
CP00005G03110 cpa name=evm.TU.supercontig_5.311;pid=evm.TU.supercontig_5.311;prot=eq;transcript=eq - supercontig_5 No
FV4G22630 fve Microtubule-associated protein TORTIFOLIA1 (probable) transcript=eq;prot=eq;pid=gene00735 + LG4 No
GM01G04500 gma 01 pid=16243396;transcript=eq;prot=eq;name=Glyma01g04500.1 + Gm01 No
GM02G03050 gma 02 pid=16246801;transcript=eq;prot=eq;name=Glyma02g03050.1 - Gm02 No
MD13G005770 mdo transcript=eq;prot=eq;pid=MDP0000871011;tid=MDP0000871011;contig=MDC009974.164 - 13 No
MD16G004630 mdo transcript=eq;prot=eq;pid=MDP0000158114;tid=MDP0000158114;contig=MDC000689.139 - 16 No
ME04209G00330 mes PACid=17993650;RNAname=cassava4.1_003051m;GeneName=cassava4.1_003051m.g;transcript=eq;prot=eq - scaffold04209 No
ME11495G01010 mes PACid=17988395;RNAname=cassava4.1_003264m;GeneName=cassava4.1_003264m.g;transcript=eq;prot=eq - scaffold11495 No
MT5G036950 mtr Microtubule-associated protein TORTIFOLIA1 (AHRD V1 ***- Q9T041); contains Interpro domain(s) IPR011989 Armadillo-like helical transcript=eq;prot=eq;pid=Medtr5g036950.1; + 5 No
PT08G19450 ptr PACid=17338294;name=POPTR_0008s19640;alias=pt026662m; transcript=eq;prot=eq;protein_id=17338294; - scaffold_8 No
PT10G03690 ptr PACid=17322239;name=POPTR_0010s04830;alias=pt011386m; transcript=eq;prot=eq;protein_id=17322239; + scaffold_10 No
RC29736G00900 rco name=29736.m002094;gene=29736.t000090;note=29736.t000090;transcript=eq;prot=eq - 29736 No
TC00G075270 tca RNAname=Tc00_t075270;GeneName=Tc00_g075270;transcript=eq;prot=eq + Tc00 No
VV01G13180 vvi name=GSVIVG01020135001; transcript=eq;prot=eq;name=GSVIVG01020135001;pid=GSVIVG01020135001;tid=GSVIVT01020135001; + chr1 No
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