Sub-family  

Parent family
HOM000372
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO011770 has 16 genes in 11 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 16 records out of 16 total, starting on record 1, ending on 16

gene_id species description comment strand chr outlier
AL1G02160 aly name=fgenesh2_kg.1__215__AT1G02900.1;pid=470261;prot=eq;tid=470261 - scaffold_1 No
AL7G27790 aly name=fgenesh2_kg.7__2737__AT4G15800.1;pid=493304;prot=eq;tid=493304 - scaffold_7 No
AT1G02900 ath Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. Mediates Ca2+-dependent signaling.;rapid alkalinization factor 1 transcript=eq;prot=eq; - 1 No
CP00048G00900 cpa name=evm.TU.supercontig_48.90;pid=evm.TU.supercontig_48.90;prot=eq;transcript=eq + supercontig_48 No
GM10G29260 gma 10 pid=16280329;transcript=eq;prot=eq;name=Glyma10g29260.1 - Gm10 No
GM20G38020 gma 20 pid=16318238;transcript=eq;prot=eq;name=Glyma20g38020.1 + Gm20 No
LJ0G457590 lja prot=eq;transcript=eq;scaffold=LjT01F21;name=LjT01F21.60.nc - chr0 No
ME03614G04990 mes PACid=17965788;RNAname=cassava4.1_026628m;GeneName=cassava4.1_026628m.g;transcript=eq;prot=eq + scaffold03614 No
ME11110G00210 mes PACid=17966631;RNAname=cassava4.1_027623m;GeneName=cassava4.1_027623m.g;transcript=eq;prot=eq + scaffold11110 No
MT7G113080 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR008801 Rapid ALkalinization Factor transcript=eq;prot=eq;pid=Medtr7g113080.1; - 7 No
PT05G02400 ptr PACid=17329391;name=POPTR_0005s02590;alias=pt034269m,Pt-RALFL23.2,grail3.0133002601; transcript=eq;prot=eq;protein_id=17329391; - scaffold_5 No
PT13G01620 ptr PACid=17340247;name=POPTR_0013s01810;alias=pt031417m,estExt_Genewise1_v1.C_LG_XIII0862,Pt-RALFL23.3; transcript=eq;prot=eq;protein_id=17340247; - scaffold_13 No
RC30128G02140 rco name=30128.m008822;gene=30128.t000283;note=30128.t000283;transcript=eq;prot=eq + 30128 No
TC01G030240 tca RNAname=Tc01_t030240;GeneName=Tc01_g030240;transcript=eq;prot=eq + Tc01 No
TC05G030170 tca RNAname=Tc05_t030170;GeneName=Tc05_g030170;transcript=eq;prot=eq + Tc05 No
VV07G08040 vvi name=GSVIVG01027973001; transcript=eq;prot=eq;name=GSVIVG01027973001;pid=GSVIVG01027973001;tid=GSVIVT01027973001; + chr7 No
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