Sub-family  

Parent family
HOM000003
 
Keywords


Overview of gene family content




bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO011642 has 17 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 17 records out of 17 total, starting on record 1, ending on 17

gene_id species description comment strand chr outlier
BD4G18590 bdi pid=Bradi4g18590.2;tid=Bradi4g18590.2;GeneName=Bradi4g18590;transcript=eq;prot=eq + Bd4 No
CP00081G00840 cpa name=evm.TU.supercontig_81.84;pid=evm.TU.supercontig_81.84;prot=eq;transcript=eq + supercontig_81 No
FV6G46290 fve Pentatricopeptide repeat-containing protein At2g13420, mitochondrial, Precursor (putative) transcript=eq;prot=eq;pid=gene02457 + LG6 No
GM02G43940 gma 02 pid=16250086;transcript=eq;prot=eq;name=Glyma02g43940.1 + Gm02 No
LJ0G118300 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_037266;name=LjSGA_037266.2 + LjSGA_037266 No
MD17G017670 mdo transcript=eq;prot=eq;pid=MDP0000152654;tid=MDP0000152654;contig=MDC018935.42 + 17 No
ME02932G00030 mes PACid=17988492;RNAname=cassava4.1_007308m;GeneName=cassava4.1_007308m.g;transcript=eq;prot=eq + scaffold02932 No
ME09601G00020 mes PACid=17985449;RNAname=cassava4.1_024576m;GeneName=cassava4.1_024576m.g;transcript=eq;prot=eq + scaffold09601 No
MT3G008430 mtr Pentatricopeptide repeat-containing protein At2g13420, mitochondrial (AHRD V1 ***- Q0WP85); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat transcript=eq;prot=eq;pid=Medtr3g008430.1; - 3 No
OS08G28180 osa PPR repeat domain containing protein, putative, expressed transcript=eq;prot=eq; + 8 No
OSINDICA_08G26420 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC026508; + Chr08 No
PT05G06590 ptr PACid=17306683;name=POPTR_0005s06780;alias=pt032596m,eugene3.00050061; transcript=eq;prot=eq;protein_id=17306683; + scaffold_5 No
RC30128G03460 rco name=30128.m008958;gene=30128.t000419;note=30128.t000419;transcript=eq;prot=eq - 30128 No
SB05G018050 sbi 5 prot=eq;pid=5040347;tid=5040347 - chr_5 No
TC10G010640 tca RNAname=Tc10_t010640;GeneName=Tc10_g010640;transcript=eq;prot=eq - Tc10 No
VV04G04880 vvi name=GSVIVG01026463001; transcript=eq;prot=eq;name=GSVIVG01026463001;pid=GSVIVG01026463001;tid=GSVIVT01026463001; + chr4 No
ZM05G41970 zma name=GRMZM2G018757;tid=GRMZM2G018757_T01;pid=GRMZM2G018757_P01;transcript=eq;prot=eq; + 5 No
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