Sub-family  

Parent family
HOM000031
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (2 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO011411 has 17 genes in 12 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 17 records out of 17 total, starting on record 1, ending on 17

gene_id species description comment strand chr outlier
AL5G24510 aly name=fgenesh1_pg.C_scaffold_5001929;pid=348537;prot=eq;tid=348537 + scaffold_5 No
AT3G54450 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72125.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 3 No
CP00271G00060 cpa name=evm.TU.supercontig_271.6;pid=evm.TU.supercontig_271.6;prot=eq;transcript=eq - supercontig_271 No
CP00271G00080 cpa name=evm.TU.supercontig_271.8;pid=evm.TU.supercontig_271.8;prot=eq;transcript=eq + supercontig_271 No
FV7G16680 fve Peptide transporter PTR1 (probable) transcript=eq;prot=eq;pid=gene14290 + LG7 No
GM13G26760 gma 13 pid=16291676;transcript=eq;prot=eq;name=Glyma13g26760.1 + Gm13 No
GM15G37760 gma 15 pid=16300346;transcript=eq;prot=eq;name=Glyma15g37760.1 + Gm15 No
MD07G002690 mdo transcript=eq;prot=eq;pid=MDP0000534716;tid=MDP0000534716;contig=MDC020253.264 + 7 No
ME05875G02320 mes PACid=17973037;RNAname=cassava4.1_006984m;GeneName=cassava4.1_006984m.g;transcript=ne;prot=eq - scaffold05875 No
ME08873G00200 mes PACid=17984366;RNAname=cassava4.1_025050m;GeneName=cassava4.1_025050m.g;transcript=eq;prot=eq - scaffold08873 No
MT3G014790 mtr Peptide transporter PTR5 (AHRD V1 **** Q9LFB8); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region transcript=eq;prot=eq;pid=Medtr3g014790.1; + 3 No
MT8G038880 mtr Peptide transporter PTR1 (AHRD V1 **** Q9M390); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region transcript=eq;prot=eq;pid=Medtr8g038880.1; + 8 No
PT01G06250 ptr PACid=17329060;name=POPTR_0001s06440;alias=pt037948m; transcript=eq;prot=eq;protein_id=17329060; - scaffold_1 No
RC30131G03430 rco name=30131.m007198;gene=30131.t000349;note=30131.t000349;transcript=eq;prot=eq + 30131 No
TC04G011540 tca RNAname=Tc04_t011540;GeneName=Tc04_g011540;transcript=eq;prot=eq - Tc04 No
TC04G011550 tca RNAname=Tc04_t011550;GeneName=Tc04_g011550;transcript=eq;prot=eq - Tc04 No
VV00G26280 vvi name=GSVIVG01013493001; transcript=eq;prot=eq;name=GSVIVG01013493001;pid=GSVIVG01013493001;tid=GSVIVT01013493001; + chr13_random No
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