Sub-family  

Parent family
HOM000533
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO011232 has 17 genes in 14 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 17 records out of 17 total, starting on record 1, ending on 17

gene_id species description comment strand chr outlier
AL1G41100 aly name=fgenesh2_kg.1__3868__AT1G47740.1;pid=473914;prot=eq;tid=473914 + scaffold_1 No
AT1G47740 ath PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 836 Blast hits to 836 proteins in 174 species: Archae - 0; Bacteria - 2; Metazoa - 222; Fungi - 83; Plants - 351; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein transcript=eq;prot=eq; + 1 No
BD1G71290 bdi pid=Bradi1g71290.2;tid=Bradi1g71290.2;GeneName=Bradi1g71290;transcript=eq;prot=eq - Bd1 No
GM14G08270 gma 14 pid=16294812;transcript=eq;prot=eq;name=Glyma14g08270.1 - Gm14 No
GM17G36780 gma 17 pid=16307276;transcript=eq;prot=eq;name=Glyma17g36780.1 + Gm17 No
MD00G017570 mdo transcript=eq;prot=eq;pid=MDP0000160640;tid=MDP0000160640;contig=MDC000734.382 - MDC000734.382 No
MD08G003810 mdo transcript=eq;prot=eq;pid=MDP0000185221;tid=MDP0000185221;contig=MDC010604.95 - 8 No
ME07012G01420 mes PACid=17960564;RNAname=cassava4.1_014790m;GeneName=cassava4.1_014790m.g;transcript=eq;prot=eq + scaffold07012 No
OS03G10200 osa ethylene%2Dresponsive element%2Dbinding protein, putative, expressed transcript=eq;prot=eq; + 3 No
OSINDICA_03G08700 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC005499; + Chr03 No
PT02G13340 ptr PACid=17330378;name=POPTR_0002s13530;alias=pt021356m,estExt_fgenesh4_pm.C_LG_II0597; transcript=eq;prot=eq;protein_id=17330378; - scaffold_2 No
PT14G03990 ptr PACid=17324633;name=POPTR_0014s04180;alias=pt036064m,estExt_fgenesh4_pm.C_400060; transcript=eq;prot=eq;protein_id=17324633; - scaffold_14 No
RC30170G03590 rco name=30170.m014003;gene=30170.t000415;note=30170.t000415;transcript=eq;prot=eq - 30170 No
SB01G043920 sbi 1 prot=eq;pid=5030331;tid=5030331 - chr_1 No
TC08G001770 tca RNAname=Tc08_t001770;GeneName=Tc08_g001770;transcript=eq;prot=eq - Tc08 No
VV18G08510 vvi name=GSVIVG01009662001; transcript=eq;prot=eq;name=GSVIVG01009662001;pid=GSVIVG01009662001;tid=GSVIVT01009662001; - chr18 No
ZM01G07280 zma hypothetical protein LOC100272295 name=GRMZM2G005435;tid=GRMZM2G005435_T02;pid=GRMZM2G005435_P02;transcript=eq;prot=eq; - 1 No
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