Sub-family  

Parent family
HOM000308
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO011165 has 17 genes in 14 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 17 records out of 17 total, starting on record 1, ending on 17

gene_id species description comment strand chr outlier
AL0G05500 aly name=scaffold_16600003.1;pid=920276;prot=eq;tid=951789 + scaffold_166 No
AL3G25130 aly name=scaffold_302731.1;pid=898761;prot=eq;tid=930274 - scaffold_3 No
AT3G22800 ath Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G24480.1); Has 229273 Blast hits to 72952 proteins in 2610 species: Archae - 422; Bacteria - 37303; Metazoa - 68145; Fungi - 17365; Plants - 71911; Viruses - 5341; Other Eukaryotes - 28786 (source: NCBI BLink).;Leucine-rich repeat (LRR) family protein transcript=eq;prot=eq; - 3 No
BD1G05600 bdi pid=Bradi1g05600.1;tid=Bradi1g05600.1;GeneName=Bradi1g05600;transcript=eq;prot=eq + Bd1 No
GM20G28790 gma 20 pid=16317190;transcript=eq;prot=eq;name=Glyma20g28790.1 - Gm20 No
LJ5G026440 lja prot=eq;transcript=eq;scaffold=CM0357;name=chr5.CM0357.460.nc + chr5 No
MD13G019560 mdo transcript=eq;prot=eq;pid=MDP0000450791;tid=MDP0000450791;contig=MDC020026.257 - 13 No
ME01551G01830 mes PACid=17961817;RNAname=cassava4.1_031017m;GeneName=cassava4.1_031017m.g;transcript=ne;prot=eq + scaffold01551 No
ME10563G00250 mes PACid=17993451;RNAname=cassava4.1_022962m;GeneName=cassava4.1_022962m.g;transcript=ne;prot=eq - scaffold10563 No
OS03G58110 osa uncharacterized protein At4g06744 precursor, putative, expressed transcript=eq;prot=eq; - 3 No
OSINDICA_03G55450 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC008583; - Chr03 No
RC29844G00790 rco name=29844.m003234;gene=29844.t000080;note=29844.t000080;transcript=eq;prot=eq + 29844 No
SB01G005300 sbi 1 prot=eq;pid=5047965;tid=5047965 + chr_1 No
TC04G024200 tca RNAname=Tc04_t024200;GeneName=Tc04_g024200;transcript=eq;prot=eq - Tc04 No
VV05G05310 vvi name=GSVIVG01018025001; transcript=eq;prot=eq;name=GSVIVG01018025001;pid=GSVIVG01018025001;tid=GSVIVT01018025001; - chr5 No
ZM01G55950 zma systemin receptor SR160 name=GRMZM2G070322;tid=GRMZM2G070322_T01;pid=GRMZM2G070322_P01;transcript=eq;prot=eq; - 1 No
ZM05G02670 zma hypothetical protein LOC100191200 name=GRMZM2G099491;tid=GRMZM2G099491_T01;pid=GRMZM2G099491_P01;transcript=eq;prot=eq; + 5 No
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